Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0781 |
Symbol | |
ID | 5081991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 870454 |
End bp | 871515 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640497907 |
Product | porin |
Protein accession | YP_001182310 |
Protein GI | 146291886 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000021464 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA CATTCATCTC TGCATCAGTT GCATCAGTAT TGGCATTGGC TTCATTCGGT GCGCTAGCCG AAGGCCCAAG CTTCTATGGT CGTTTAGATC TAGCAGTGAC TAATACTGAT TCAAGCACTA CTCTACAAGG CAGCACTAAA GGTGCAACTA TTGGTGAGAG CGGTACTTAT CTTGAGAATA ACTTCTCATG GTTAGGTGTA AAAGGCTCTG AAAAAGTTGC CGATGGCGTA GATATTGTTT ACCAAATGGA GTTTGGTGTT GATAACACTA CTAATTCTGG TAATACATTC AATGCTCGTA ACACTTTCTT AGGTTTTAAA ACGGTTGCTG GTACAGTGTT AGCGGGTCGT AATGATACCG TATTTAAACA AGCTGAAGGT AACGTTGACG TGTTTGGTAA CACCAACGCC GATATCGACC GTTTAGTGAG CGCTCAAGCG GGTGCTGGTC GTAGTGGTGA TGGCGTATGG TACTATTCTC CAAAAATTGC TGATTTAGTG ACTCTGAACG CGACTTATTT ATTTGATGAT AACTATGGCA CTTCAGAAAG CATGTATGCC GTAAGTGCGA CTTTAGGTGA TAAAGCATTT AAAGAGCAAA ACTATTATTT AGCGGCTGCT TATAACAAAG CTATTGATGG CGTAGATGCA TACCGTGGTG TGGCTCAGGC TAAGTTTGGT GACTTTACTG TTGGCGGTTT ATTCCAACAT GCAGAAAGCA TCGTGAATGA TAACCGTGAT GGTAACTCAT ACTTTGTGAA CGTAGTGTAC AAACTACAAA ACGGTGTGAA TCTGAAAGCC GAATACGGTA AAGATGAAGC TGGTTTCGGT AGCTACTTCA AAAATGCATC AGGCCTTAAC AACAATATGA CCGTAGATTT GGATGACGTT AATGTTGATC AAATCACTAT CGGTGCTGAT TACCGTTTAG TTAAATCAAC CTTGTTGTTT GCACACTATG CACACTATGA AGGTGATTTC AAACAAAATG GTGTTAAACA AGATCTAATT GAAGATGATG TTGTTTCTAT CGGTGTACGT TACGATTTCT AA
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Protein sequence | MKKTFISASV ASVLALASFG ALAEGPSFYG RLDLAVTNTD SSTTLQGSTK GATIGESGTY LENNFSWLGV KGSEKVADGV DIVYQMEFGV DNTTNSGNTF NARNTFLGFK TVAGTVLAGR NDTVFKQAEG NVDVFGNTNA DIDRLVSAQA GAGRSGDGVW YYSPKIADLV TLNATYLFDD NYGTSESMYA VSATLGDKAF KEQNYYLAAA YNKAIDGVDA YRGVAQAKFG DFTVGGLFQH AESIVNDNRD GNSYFVNVVY KLQNGVNLKA EYGKDEAGFG SYFKNASGLN NNMTVDLDDV NVDQITIGAD YRLVKSTLLF AHYAHYEGDF KQNGVKQDLI EDDVVSIGVR YDF
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