Gene Sputcn32_0719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0719 
Symbol 
ID5082027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp807919 
End bp808470 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content44% 
IMG OID640497844 
Product3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 
Protein accessionYP_001182248 
Protein GI146291824 
COG category[R] General function prediction only 
COG ID[COG1778] Low specificity phosphatase (HAD superfamily) 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.271324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACAGC AAGGATTTTA CGGCCCTATC AGCGATGATG TTTGGCAAAG AGCACAAAAA 
ATAAAACTGC TTATCTGTGA TGTTGATGGC GTATTTTCTG ACGGGCGCAT TTATTTAAGT 
AATGCAGGTG AAGAACTTAA AGCATTTCAT ACCCGTGATG GTTATGGTGT TCGCTCGCTA 
CTGACCAGCG GTTTTAACAT GGCAGTTATT ACAGGTCGCC AATCTAAGAT TGTTGCCAAT 
CGTATGACTG CCCTAGGCAT TACAGATATT TATCAAGGTG TTGATAATAA ATTCGAGCCT 
TATCAAGCCC TACTATCACA CTATAATGTC ATCCCAGAAG AAGTGGCTTA CATCGGGGAT 
GATATTGTCG ATCTTCCGGT GATGAACGCG GTAGGTTTAG CAGTATGTGT CGCCGATGGT 
CATCCCTATG TCCGTCAACA GGCACACTTT GTCACCAACC TCAACGGCGG ACATGGCGCG 
CTAAGGGAAT TAACCGATTT ACTGCTGTTA AGCCAAAATA AGTTCACTTC GGCCCACGGG 
ATGAGTATAT GA
 
Protein sequence
MPQQGFYGPI SDDVWQRAQK IKLLICDVDG VFSDGRIYLS NAGEELKAFH TRDGYGVRSL 
LTSGFNMAVI TGRQSKIVAN RMTALGITDI YQGVDNKFEP YQALLSHYNV IPEEVAYIGD 
DIVDLPVMNA VGLAVCVADG HPYVRQQAHF VTNLNGGHGA LRELTDLLLL SQNKFTSAHG 
MSI