Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0633 |
Symbol | |
ID | 5080423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 699489 |
End bp | 700295 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640497758 |
Product | hydratase/decarboxylase family protein |
Protein accession | YP_001182162 |
Protein GI | 146291738 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTATCTA CCGTCACACT CGAACAAGTT AAAACGCATA TTAATACCGC AGCCAAAGAA TTAGCCGAGC GCCGCACCGC AGGCACGAGC GGCGATTTAC TGATCCCAGA ACTAAGGCCA ACCAGCTTCG AACAGGCCTT CGCTATTCAA CAAACCGTGG CAGAAATATA TAAGGCAAGC GATAACAATC CTATCGCGGC GTGGAAATGC CTCTTACCCA CAGCGGAAAA AACCGTGGTG GCGCCTATTT ATCAAGTTGA TGTGTACCAA CAATCGACCA CTTGCCCACT CTATCCATCG ACTAAAGGGC TTGCCCGAGT CGAACCCGAA CTCGCCTTCG AGATTGCTCG CGATTTACCG CCAAGAGCCA CGCCTTACAC TGAGGCTGAA ATCGATGCGG CCTTAGGCTA TACACGCTTA GCCTTGGAAT TGATCAAAAG CCGCTACCAC ACACCCAGTG AAGCGACGCA TTTTGATGCC CTCGCCGATG GCTTAGTCAA TCAAGGGCTG TGGTTAGGGC CAGTACTTAA TCCGCAAGAA GGTTTAGAGA CTAGTCGTTT TGAACTCCGC ATTGATATTC AGGATGGCGA CACTCTGCAA AAATCCGCCA TTCATCCTAA CGGTTTCCCT AAGGCGGGAC TCTACTGGTT AGTTAACTTT TTATCCGCCC AAGGCATTGG CTTAACGCAA GGGCAATATG TGATCACAGG CTCCTACGCT GGCGTGCTCG ATCTGCCATT GGCACAGGTC TGCAAATTTG AATACGGCGC GCTTGGGCAG TTCGCCGTGA CTTTTATTGC CAAATAA
|
Protein sequence | MLSTVTLEQV KTHINTAAKE LAERRTAGTS GDLLIPELRP TSFEQAFAIQ QTVAEIYKAS DNNPIAAWKC LLPTAEKTVV APIYQVDVYQ QSTTCPLYPS TKGLARVEPE LAFEIARDLP PRATPYTEAE IDAALGYTRL ALELIKSRYH TPSEATHFDA LADGLVNQGL WLGPVLNPQE GLETSRFELR IDIQDGDTLQ KSAIHPNGFP KAGLYWLVNF LSAQGIGLTQ GQYVITGSYA GVLDLPLAQV CKFEYGALGQ FAVTFIAK
|
| |