Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0610 |
Symbol | |
ID | 5080400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 671645 |
End bp | 672262 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640497737 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_001182141 |
Protein GI | 146291717 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTTA AGATTGGCCA AAGGGCGGCA CCACAGGGTA GCCATTTTTT ATCTGAGCAG TTTAGTGGCT TATCCGAGAA TGTGCAGGAG TGGCAGGAGG TTGAATTTGA GGATTGCGAG TTTTTGGATT GCCATTTTAG CGAGAGTACC TTCCGTAAAT GTAAGTTTAT CGAGTGCCGC TTTGTGCGCT GTAACTTGAG TTTAGTCAAA GTGCCCCAAT GCCAGTTCAA TGCCGTTGTA TTTGAAGAAT GTAAGCTCGT CGGTATAGAT TGGACCCGCG CTGCATGGCC ACGTTTATCC TTTGCTGCGC CATTTTCCTT TAAACAATGC ATCCTCAACG ATAGTTCTTT TCTTGGTTTA TCCCTCGACG AAATAGTGAT TGAGGAGTGT AAAGCCCACG ATGTGGATTT TCGAGAAGGC AGCTTCAATC GAGCCAATTT CACCTACACG GATTTTAGCC ATAGCCTGTT TGGCCGCACT CAATTAGCTG ATGCGGATTT CTTTGAAGCG ACAAATTACG ATATTGATAT TTTTAATAAT AAAATCAAAG GGGCTAAATT TAGTTGTGAT GAGGCGATTC GTTTGCTCAA TTGTCTCGAT ATCGAACTTG TTGATTAA
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Protein sequence | MAFKIGQRAA PQGSHFLSEQ FSGLSENVQE WQEVEFEDCE FLDCHFSEST FRKCKFIECR FVRCNLSLVK VPQCQFNAVV FEECKLVGID WTRAAWPRLS FAAPFSFKQC ILNDSSFLGL SLDEIVIEEC KAHDVDFREG SFNRANFTYT DFSHSLFGRT QLADADFFEA TNYDIDIFNN KIKGAKFSCD EAIRLLNCLD IELVD
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