| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0603 |
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| Symbol | |
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| ID | 5080641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 663442 |
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| End bp | 665592 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640497730 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001182134 |
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| Protein GI | 146291710 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00298801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCAC CACGCTTATC CCTACTCTAT TCAGCCATGT TGCTGGCGCT AGGCACCGCG
GGCCTAAGCC ATGCGGATGA CAGTGCCACC AACAATAAAA CCACTGATAA TATTGAAAAA
ATTGAAGTGA AAGGCAGTTA TATCGCTGGC TACAATGCCA GCACTGCCAG CGGAGCCTCT
CGCCTTGATT TAGCAATAAG CGATATTCCC CAATCGGTAT CGGTGATCAC CAATGCCCAG
ATGAGTGATT TCCAACTCAC TAACATTAAT ACCGCCCTCG ACTCGGCAAC GGGTGTGAAT
GTTGAGCGAA TTGAAACCGA CCGTACCTAT TACACCGCCC GAGGTTTCGA TATTACCAAC
TTCCAAGTGG ATGGCATTGG TTTACCCTTA AGCTCGGGTA GTAATCATGC CGATGAAGAT
ACCGCGATTT ATGATCGTAT CGAAGTGATC CGTGGTGCTA ACGGTTTGAT GACGGGCGTG
GGTAATCCTT CGGCGACCAT TAACTTTATC CGTAAACGCC CAACGGCCGA CACTCAACTG
AATATCAATG GCAGTTATGG CAGCTTTAAT AACACCCGAC TCGAACTCGA CGGTTCCACC
AAGCTGAGTG AGAATATTGC CGCCCGCGCC GTGGCGGTAA AACAAACTCA AGACTCGTAC
CTTGACCGTT ATGAGCAAGA CAAAACCGTG CTCTATGCCT TTATTGAGGC CAATTTATCC
GATAACACCA GCTTTTCCAT CAGCCACAGT TATATCAATA ACGACGCCAA CGGCGGCCTG
TGGGGCGCAT TGCCACTGTA TTTTACCGAT GGCAGCGCCA CAAACTACGA CCGCTCCACC
AGCACATCGG CCAATTGGTC GGCTTGGGTG GTAGAGAAAA ACAATACCGT AGTTGAACTG
AGTCATTACT TTAATGATGA TTGGTACTTA CGGGCGACTT ATTCCCATAA ATCCGCCGAT
GAAGACACTG AACTCTTTTA TGTTTTCGGT ACACCTGATA AAACCACAGG CTTAGGGTTA
ACGGGTTACG GCAGCGCCTA TGATGCGAAA GAAACCACCG ATCTTGCTGA TATTTATGTA
AAAGGTGATT TTAGTCTGTT TGGCCGTGAT CATCAGTTAG TCTTTGGTGC TAACTATTCC
ACCGCCGATA AACAAGAACA CTCCCTCTAC GATGACACCA CGGGCAATGG TTTCCCGAAA
ATGCCCGATC TCAACACTTG GGATGGTAAT ACCCCGTACC CCACCTTTGC TGACAGACCA
TCGGGGAGCG ATACCGAATC GACTCAAAAA GCCGCCTACT TTACCGGACG CTTTAATCTG
TTTGAGGATA TGCACCTTAT CGCTGGAGGC CGTTTTAACC GTTGGGATAC CAAAGGTGAA
TCCTATGGTA AGTCTCGTGA CGCCGAAGCC GAGGAGTTTA TTCCCTACAT CGGCGCCGTT
TACCGCTTTA TGCCAGAATT GGTCGCCTAT GCCAGCTATA CCGAAACCTT CTTGGCGCAA
ACCGAAGTCG ATATCAATGA GCAACCACTC GATCCAGTGA CGGGTGAAAG CAAAGAAATC
GGCCTCAAAA GCGAGCTATT TGAGGGTAAG TTGATTGCCA GCTTAGCTTG TTTCCAAATC
GATCAGGTCA ACCTCGCGAA GTTAGATCCT GCCACCATTA ACTTACCGCC TAACCAGCAA
AAATATATTG CGGCTGACGG TATCAGCAGT GATGGCTATG AAATAGATAT TGCAGGCGAA
ATCTATGATG GTTTGCAAGT GAGTGTTGGA TTTACTGACT TCGATATTAA AGGCGATGAG
TTAGTGGCCA ACTACACCCC AAGCAAGCTA TTCAAATTAG CGGCAACCTA CGATGTTGCC
CAACTAGAGG GCTTAAGCTT GGGGGTCAAT ATGCGCTGGC AGGATGATAT TTCTCGCGAG
CAAGGCACGG TCGGTGCAGG TTTTGCTAAT GCGGGCGACA CCATTATCAC CCGTCAAGAC
GCTTATGCCA TCGTCGACCT GATGGCGCGC TATGCCTTTA GCGAAAACAT CAGCCTCACC
TTCAATGCCA ATAACGTGAC CGATGAGAAA TACATTAACA GTTTGTACTG GGCGCAAGGG
TTTTACGGCG CACCAGCCAA CTACAGCGCA ACCTTAAGCT GGAAGCTGTA A
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| Protein sequence | MNSPRLSLLY SAMLLALGTA GLSHADDSAT NNKTTDNIEK IEVKGSYIAG YNASTASGAS
RLDLAISDIP QSVSVITNAQ MSDFQLTNIN TALDSATGVN VERIETDRTY YTARGFDITN
FQVDGIGLPL SSGSNHADED TAIYDRIEVI RGANGLMTGV GNPSATINFI RKRPTADTQL
NINGSYGSFN NTRLELDGST KLSENIAARA VAVKQTQDSY LDRYEQDKTV LYAFIEANLS
DNTSFSISHS YINNDANGGL WGALPLYFTD GSATNYDRST STSANWSAWV VEKNNTVVEL
SHYFNDDWYL RATYSHKSAD EDTELFYVFG TPDKTTGLGL TGYGSAYDAK ETTDLADIYV
KGDFSLFGRD HQLVFGANYS TADKQEHSLY DDTTGNGFPK MPDLNTWDGN TPYPTFADRP
SGSDTESTQK AAYFTGRFNL FEDMHLIAGG RFNRWDTKGE SYGKSRDAEA EEFIPYIGAV
YRFMPELVAY ASYTETFLAQ TEVDINEQPL DPVTGESKEI GLKSELFEGK LIASLACFQI
DQVNLAKLDP ATINLPPNQQ KYIAADGISS DGYEIDIAGE IYDGLQVSVG FTDFDIKGDE
LVANYTPSKL FKLAATYDVA QLEGLSLGVN MRWQDDISRE QGTVGAGFAN AGDTIITRQD
AYAIVDLMAR YAFSENISLT FNANNVTDEK YINSLYWAQG FYGAPANYSA TLSWKL
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