Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0595 |
Symbol | |
ID | 5080633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 653587 |
End bp | 655728 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640497722 |
Product | TonB-dependent receptor |
Protein accession | YP_001182126 |
Protein GI | 146291702 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGACA ATAAAATGGC TGCAAATTCT GCGTATTTAT CTCACGCCTT TAACACCTCA ATACTCTATT CATCCCTTGC GATTGCGCTA GGAATTGCCC CTATAACACA GGCAATGGCA GATGATAGCG AAGTCGCTAA TATTGAACAT ATCCAAGTCC ATGGTCAGCA AAGTGAGCCC CGAAACATCC TAGGCTCAGC AGAAAATAGA CTGAAAGAAC AAGGTGTTGA TTTTTCTGAA GCGGGCGGCG TATCGGCCCT ACCTATCCTC AATGGCATGA TGGGCGATCG CATCAAAGTG CTGGTCGATG GCGCAGACAT TACCGCCTCC TGCGCTAACC AAATGAATCC ACCCCTGTCC TATATCTCCG CCAATCAAAT CACCACGGCC GAAGTCATTG CGGGCGTATC GCCAGTCAGT GCCGGTGGCG ACAATATTGC GGGTGTGATC AAGGTTAGCA GCCTTAACCC TAAATTTGGT GAAAGCGAGG CTATCAAGTG GAATAGTGGC GATATTTCAA CTGGATACCG CAGCGTGAGT GACACTTTAT TACTCGGCAC CAACGCCACA GTCGCCAGCA AAAATGTCAG CCTTAGCTAT CAAGGCGCCT ATGAAGATTC CAACAGCTAT AAAGATGGCA ATGGCGATAA AGTTATTGAT ACCTTATACC GTGCACAAAA CCATGCATTG ACCGCCGCAT GGCGCGATGA GACTCAAGAA GTTGCCATCA AACTGACCCA TCAGAATATT CCATTCCAAG GTTTTGCTAA CCAATACATG GATATGACGG ATAACAAGAG TTACGGTGCC CTCGCCCGTT ATCAACTTAA ACTCGACGAT GACGGTGAAT TCAGTGCCCA AGTAAACTGG CACGGCGTGA AACACGAGAT GGGCTTTTTC ACCCCAGAAA AAACCGGCAA GATGCCAATG AACACTGAAG GTGATGACTA CAGCTATCAA CTACACTGGC GCTTGCCAAT GGGTGATGAC AGCACCTTAC TGGTCGGCCA AGAATACTAT AGCTACCAGC TCGACGATGT TTGGCCTTCG GTGCCTGGCA CTATGATGGC GCCCAATGAC TACATCAACA TCAACGATGG CCAGCGAAAA CGCGCCGCCG TTTATGGCGA ATGGCAGCAA GATTTAAGTC AAAGCTGGTG GTTATCGGCG GGTGTTCGCT TTGAGTATGT CACCACCAAT ACGGGTGAAG TCCAAGCTTA TAGCCCTAGC TCTATGATGG GCATGCCTAA TGTCGACGCC CAAGCGGCAA AAGCCTTTAA TGCAATGGAC AGAAGTAGAG ACGATAATCT TATCGATGCG ACATTACTGG CGCGTTATCA AGTATCTACC AATCAACAAC TGGAATTTGG ACTCGCCCGT AAAAATCGTG CTCCAAACCT TTATGAGCGT TATAGCTGGG GCCGCGGCAC TATGGCGACC ACTATGATAG GTTGGTATGG TGATGGTAAT GGTTATGTGG GTAATCCGGA TCTTAAACCA GAAACCGCCC ATACCTTAAG CGCAGCCTAC AAATATAACG GTGATAGCTG GCAAGTCTCG ACCACGGCTT GGTACACAGC TGTGACTGAC TATGTCGATG CCGAAGTCAT TGGTAGCTTT AATCGTACCA ACACGCCTGA TGGCAAACGC AATATTCTCC AATTTACTAA CCTCGATGCC AATCTCTATG GCGCACGTTT TAATGCGCTC TATCAGTTTG CCGAAACCAG CACAGGTAAG TGGCAAGTGT TAGGCAAAGT GAATGTCACC CGTGGCGAGC GAGATGAAGG TGATGAACCT TTATATCAAA TCAAGCCGTT GCAAACAGAA CTGGCACTGC AACATCAGTT AGGTAACTGG GAAAACAGTC TTTCATGGCA ATGGGTTGCG ACCAAAGATC GCGTCGATGA CCGTCGCCTT GAAAATGAAA CCGACAGTTA CTCCTTACTC AATTTGAACA GCAGCATGAA ATGGCAGGAT CTGACTGTTA CCTTCGCCGT GAATAATCTG TTCGACAGCT ACTATGAGCT GCCACTGGGC GGCGTGAGTG TGGCTGAATT TAAGGCCGAT AATACCAATG GCTTTAATCG GGTGGCTGGC GCGGGACGCT CATTTGAACT CAGCGCAAGC TATGCGTTTT AA
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Protein sequence | MEDNKMAANS AYLSHAFNTS ILYSSLAIAL GIAPITQAMA DDSEVANIEH IQVHGQQSEP RNILGSAENR LKEQGVDFSE AGGVSALPIL NGMMGDRIKV LVDGADITAS CANQMNPPLS YISANQITTA EVIAGVSPVS AGGDNIAGVI KVSSLNPKFG ESEAIKWNSG DISTGYRSVS DTLLLGTNAT VASKNVSLSY QGAYEDSNSY KDGNGDKVID TLYRAQNHAL TAAWRDETQE VAIKLTHQNI PFQGFANQYM DMTDNKSYGA LARYQLKLDD DGEFSAQVNW HGVKHEMGFF TPEKTGKMPM NTEGDDYSYQ LHWRLPMGDD STLLVGQEYY SYQLDDVWPS VPGTMMAPND YININDGQRK RAAVYGEWQQ DLSQSWWLSA GVRFEYVTTN TGEVQAYSPS SMMGMPNVDA QAAKAFNAMD RSRDDNLIDA TLLARYQVST NQQLEFGLAR KNRAPNLYER YSWGRGTMAT TMIGWYGDGN GYVGNPDLKP ETAHTLSAAY KYNGDSWQVS TTAWYTAVTD YVDAEVIGSF NRTNTPDGKR NILQFTNLDA NLYGARFNAL YQFAETSTGK WQVLGKVNVT RGERDEGDEP LYQIKPLQTE LALQHQLGNW ENSLSWQWVA TKDRVDDRRL ENETDSYSLL NLNSSMKWQD LTVTFAVNNL FDSYYELPLG GVSVAEFKAD NTNGFNRVAG AGRSFELSAS YAF
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