| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0583 |
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| Symbol | |
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| ID | 5080621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 637078 |
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| End bp | 638052 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640497710 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001182114 |
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| Protein GI | 146291690 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCTA ATCGAATGCT GGCCCTTGTG GCGTTGGTCG CATTAGGCCT CATCTTAGCC
TATGGGCTTA AGCTGGCTTA TAGCCCGCAG CCGAGTCTAT TGCAGGGGCA GATAGAAGCC
CGAGAATACA ATGTGTCATC CAAAGTGCCC GGTCGTGTCG AGCAAGTGTT AGTGCGCCGT
GGTGATAGCG TGGCCGAAGG GGATTTGTTG TTTGCCATCC ACAGCCCAGA GCTGGATGCA
AAGTTGATGC AGGCCGAAGG GGGCCGTGAT GCTGCTCAGG CTAAGCAGTT AGAAGCCAAT
AACGGTGCCC GCAGCCAAGA AGTGATGGCA GCTAAGGAGC AATGGCTCAA GGCGCAGGCG
GCGGCAACGC TCGCTAAAAC GACTTATACC CGCGTTGAAA ACTTATTCAA CGAAGGTGTG
GCAGCAAGAC AAAAACGTGA TGAAGCCTTT ACTCAATGGC AAGCGGCAAA ATACACAGAA
CAAGCGGCCT TAGCCATGTA TCAAATGGCC GAGGAAGGCG CACGAGTTGA GACCAAAGCG
GCGGCGGCAG GCAATGCACG TATGGCTGAA GGCGCGGTAA AAGAAGTGAG CGCCGTGATG
GAAGATAGCC AAATGCGCGC CCCTAAATCG GGCGAAATTA GCGAGGTGCT ATTACAGGCG
GGTGAATTGG CACCAAGTGG TTTTCCGATT GTGAGCTTAA TTGATATGCA GGATGCTTGG
GCAGTGTTCC AAGTGCGTGA AGATCAACTC AAGCGTTTCA ACAAAGGCGA TAAAATTCAA
CTCAATATTC CGGCACTCGG GCAGGATGTC GAATTTACAG TATCCCATAT CAGTGTCATG
GGTGACTTTG CCACTTGGCG CTCGACCGAG AGTGGCCATG ACTTTGATAT GCGTACCTTT
GAGGTGGAAT TACGCCCCAA TGCACCGATT GCTAACCTAC GTGTCGGCAT GTCAGTGCTG
CTACGCGGTG AGTAA
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| Protein sequence | MRANRMLALV ALVALGLILA YGLKLAYSPQ PSLLQGQIEA REYNVSSKVP GRVEQVLVRR
GDSVAEGDLL FAIHSPELDA KLMQAEGGRD AAQAKQLEAN NGARSQEVMA AKEQWLKAQA
AATLAKTTYT RVENLFNEGV AARQKRDEAF TQWQAAKYTE QAALAMYQMA EEGARVETKA
AAAGNARMAE GAVKEVSAVM EDSQMRAPKS GEISEVLLQA GELAPSGFPI VSLIDMQDAW
AVFQVREDQL KRFNKGDKIQ LNIPALGQDV EFTVSHISVM GDFATWRSTE SGHDFDMRTF
EVELRPNAPI ANLRVGMSVL LRGE
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