| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0504 |
|---|
| Symbol | |
|---|
| ID | 5078452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 549094 |
|---|
| End bp | 550743 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640497631 |
|---|
| Product | 2-polyprenylphenol 6-hydroxylase |
|---|
| Protein accession | YP_001182035 |
|---|
| Protein GI | 146291611 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0661] Predicted unusual protein kinase |
|---|
| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTTA CCAGTATCCG CCGCGGTTAC CACGTCATAA AAACCCTGCT TCAATACGGG
TTAGATGAAG TTCTGCCGCC AAAGATGACC CCTTGGTACT TTACACTCGC TCGTAGCAGC
TTATTTTGGA TACGTAATAA ACATAAAAGC AAACCCGGTG GTGAACGCTT AAAACTGGCA
ATGCAAGAGC TCGGCCCTGT TTATATTAAA CTCGGACAAA TGCTCTCAAC CCGGCGCGAT
TTATTGAGTG ATGAATGGGC CATTGAGTTA GCCATGCTCC AGGACAAAGT CCCTCCCTTC
GATGGTGTGC TCGCTCGCAA AGCAATTGAG GCCGAGTTAA AAGCATCGAT TGAATCTTTG
TTTGATGACT TTGATGAAAC GCCATTGGCC TCTGCATCTA TTTCCCAAGT GCATACCGCG
ACGCTCAAAT CAAATGGTAA AGCCGTAGTA TTGAAAGTGC TCCGCCCTAA TGTAGAGGCT
AAAATTCTGG CCGACCTACA GTTGATGTCA CAAACTGCTA ATCTGCTTGA ATATTTTCTT
GGTGAAGGTA ATCGCTTACG CCCCGCTGAA GTGATTGAGG ACTATCGAGT CACCATTTTA
GGCGAGTTGA ATTTGAAGCT AGAAGCCTTA AATGCAATAA AGTTACGCAA TAACTTTCTC
AACTCAGATG CACTTTATGT CCCTTATGTT TATGAAGAGT TTTGTTACCC GCGTTTAATG
GTAATGGAGC GCATTTATGG CATCCCAGTC TCCGATATTG CCGCCCTAAA AGCACAAGGT
ACAAACTTTA AATTACTAGC TGAACGCGGG GTTGAGCTAT TTTTTACCCA AGTGTTCCGC
GATAATTTTT TCCATGCAGA TATGCATCCG GGGAATATTT TTATCTCCCG CGACCATCCC
GAGAATCCTT ACTACATAGG CCTAGACTGC GGCATTATGG GCACACTCAG CGAAGTCGAT
AAGCGCTATC TGGCAGAAAA CTTCCTCGCA TTCTTTAATC GTGATTACCA CCGAATCGCC
CAACTTTATA TTGAGTCTGG TTGGGTATCA GAAAAAACGG ATCTACAGGC TTTCGAACAA
GCAATCAAAG TAGTTTGTGA ACCTATGTTT AACAAACCAC TCGATGAAAT ATCTTTCGGC
CACGTGCTAT TAGAACTCTT TCGCACAGCA CGCAGCTTCG ATATCGTAGT ACAACCACAA
CTGGTATTAC TGGAAAAAAC CTTACTTTAT ATCGAAGGTC TCGGACGCCA GCTTTACCCA
CAGTTGGACT TATGGCAAAC CGCGAAACCC TTTTTAGAAC AGTGGATGGC TGAGCAAGTG
GGGCCTAAAG CGATGTTTAA AAAGGTATCC ACAAAACTGC CATATTGGTC TGATAAACTA
CCTGAATTCC CTGAACTAAT TTACGACAAC CTTAAGTTAG GCAGGAAATT GCTGAGTTCT
CAGCAACAAA TGCTAGATAA GTATCTGAAA CATCAGCAGC AAGCTCATAA AAGCAATTAC
ATGCTTATCA CTTCTGCGGT TTTATTGATC TGTGGCACGT TATTATTCAA CCAAGACGCT
ACACTGTGGT CCCCTTACGT ATGCTTAACT TCAGGCGTAC TTATGTGGTT CATCGGATGG
CGATCTAGGC CAAAGAATCG TAAATTTTAG
|
|---|
| Protein sequence | MTLTSIRRGY HVIKTLLQYG LDEVLPPKMT PWYFTLARSS LFWIRNKHKS KPGGERLKLA
MQELGPVYIK LGQMLSTRRD LLSDEWAIEL AMLQDKVPPF DGVLARKAIE AELKASIESL
FDDFDETPLA SASISQVHTA TLKSNGKAVV LKVLRPNVEA KILADLQLMS QTANLLEYFL
GEGNRLRPAE VIEDYRVTIL GELNLKLEAL NAIKLRNNFL NSDALYVPYV YEEFCYPRLM
VMERIYGIPV SDIAALKAQG TNFKLLAERG VELFFTQVFR DNFFHADMHP GNIFISRDHP
ENPYYIGLDC GIMGTLSEVD KRYLAENFLA FFNRDYHRIA QLYIESGWVS EKTDLQAFEQ
AIKVVCEPMF NKPLDEISFG HVLLELFRTA RSFDIVVQPQ LVLLEKTLLY IEGLGRQLYP
QLDLWQTAKP FLEQWMAEQV GPKAMFKKVS TKLPYWSDKL PEFPELIYDN LKLGRKLLSS
QQQMLDKYLK HQQQAHKSNY MLITSAVLLI CGTLLFNQDA TLWSPYVCLT SGVLMWFIGW
RSRPKNRKF
|
|---|
| |