Gene Sputcn32_0459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0459 
SymbolslmA 
ID5080714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp493799 
End bp494392 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content44% 
IMG OID640497579 
Productnucleoid occlusion protein 
Protein accessionYP_001181990 
Protein GI146291566 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0126678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTAA GCCCAAAAAT TAATCGTCGT GAGCATATCT TGCAATGCTT AGCACAAATG 
CTAGAAACCA GTCCTGGGCA AAGGATCACT ACGGCAAAAC TGGCCTCAGA AGTGGGGGTT 
TCGGAAGCCG CACTTTATCG TCACTTCCCT AGTAAAGCGC GAATGTTTGA AGGGCTCATT 
GAGTTTATCG AAGAGTCACT GCTCTCACGC ATCAACATCA TCATGGATGA TGAGAAAGAC 
ACCATGAAGC GCTGCCAGCT CATGCTACAA CTACTACTTA TTTTTGCTGA ACGTAATCCA 
GGGATCTCTC GAGTACTCAA TGGTGATGCA CTGTTAGGTG AAAATGAACG TCTGCGAAGT 
CGTATTAGTA GTTTATTTGC AAAAATTGAA ACCCAGTTAA AGCAAATTTT ACGGGAAAAG 
ACACTTCGGG AAGGTAGAGG CTTTAACCTA GATGAAGCCA TATTAGCCAA TTTACTGTTG 
GCCTTTGCCG AAGGTAGAAT TGCGCAATTT GTGCGAAGTG AATTCAAACT CAAACCGACC 
ACCCACTTCG ATGAACAGTG GCGTTTTATT CAACACCAGC TACTCCAAAG CTAA
 
Protein sequence
MAVSPKINRR EHILQCLAQM LETSPGQRIT TAKLASEVGV SEAALYRHFP SKARMFEGLI 
EFIEESLLSR INIIMDDEKD TMKRCQLMLQ LLLIFAERNP GISRVLNGDA LLGENERLRS 
RISSLFAKIE TQLKQILREK TLREGRGFNL DEAILANLLL AFAEGRIAQF VRSEFKLKPT 
THFDEQWRFI QHQLLQS