Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0437 |
Symbol | |
ID | 5081421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 470670 |
End bp | 473111 |
Gene Length | 2442 bp |
Protein Length | 813 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640497557 |
Product | hypothetical protein |
Protein accession | YP_001181968 |
Protein GI | 146291544 |
COG category | [R] General function prediction only |
COG ID | [COG4258] Predicted exporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCTCCA ACTTCGCCGT GCGCGCCAAT CAAGCGCTAA TACAATCATC CCCTAAATGG CGCCTCGCCA TTTGGTTGCT AGTGATGCTG TCTGCCAGTC TATGGACGTT GCAACTTTGG CAAAACGGCG CTCGGGTGCA GAGCGATATT CTCGCCATGC TGCCGCATTT ACAGCAAGAC AAACTCACCG AACGCGCCCT TAACCAAGTA GAAGCCACGC TCGCCGATCA AGTCTATATT GCGCTCGTCG CCAAGGATGA AACCACGGCA ATCGCTGCGG CACAGCTGTT GATGCAAAAG CTTGAAACTG ACCTCGTTGC TACTGGAAAA AATGCTGCAC TCACAGAGAT TCGCAGCGCC GATATGCAGC TCGGTGAAGC ATTGGGGCAA TACTATTTCC CCCACAGATT TAGATTGCTG ACAGCGCCAC AAGCTGAGGC GTTAGCAACG AAAGACATTG GAAATCTGAT TGAAGCGGCC ACAGCGCAGC TTTACAACGC CTTTAGTTAC GCCAATAGCA ACTTGCTTGC CCAAGATCCG CTGCTGTTAT TCCCCGCCAA TTTACTCGCC CTCGCGCCGA GTTCAAAAGT CAGAGCCAGT CAAGGTATTC TGCTGGCTAA TCAAGGCGAT AATGTCGCTG CGGTTGTTAT GGCAAAGGGC CAAGAAAGTG CTTTTAATCC CAATGCGCAA TTGCCGCAGA TGACGGCATT AACCCTAGGA TTGGATGCGG TTAAACAAAG CTATCCCGAT ATTACCCTGC TTAAGGCTGG CGCCCTGTTT CACGCGATTG CGGCGACCCA AACGGCTAAG AGTGAAATCT CGATTCTTGG TCTTGCATCC TTACTTGGGG TCATAACCCT AGTCTGGCTG GCGTTTCGCT CTGTAATGCC GCTACTGTTG GCAATCGTTA CCATTTCCAG CGGGCTGTTG CTGGCAGTGA CTCTTACCTT AAGCGTGTTT GGCGAGCTGC ATTTACTCAC CTTAGTGTTT GGTACTAGCT TGATTGGCAT TGCCATCGAC TACAGCTTTC ATTTTTACTG CGAGCGCTTA AGCGATACCG AACGCAACGC AAAGGCGACG GTCGCGTATA TCTTCCCCAC TGTGACGCTT GCCTTTATCA CCAGTGCCTT AGCTTATGTT GGCATAGGTT TAGCGCCGTT TCCAGGGATG CAGCAAGTGG CGATTTTCTG CGCCGCGGGG CTGCTCGGGG CCTATCTCAC CCTCATTCTC GCCTACCCAC TGTTAGCGGG AGGTCGTTTG CCATCGGGCT CCCGCCCATT AGCGTTAGCG GGGAAGTACC TTGCCAACCT CACTCAGTTA TCCAACAGAT TGACCACGCC GTTAGGCATG GGCATGTTTG CTTTAGTGAT AGTGGTGTGG TGTCTGGTTG GCGCAACAAA GTTAACCGTC GATGACGATA TTCGCCATTT ACAGCAAAGC CCCGCGAGCG TGACTGAACC TGAAAATCAG CTCAGACAGC TACTCAGCGG TGGCACAGAT AATCAATTCT TACTGGTACG CGCCGCGAGT GAAGAGGCAC TACTACAACA GCTTGAGCGA GTGTCGCCAC TGCTCGATGC CGCTATCGCT CACCAAGAAC TCGGCAACTA TGTCAGCCTC AGCCGATATC TGCCCAGCCA TCAAAGGCAA GACACGGCTT ATCGCTTACA GGGTGAAATC TATCAAACTC AGATAGATAC TGTGCTCACA AGCCTTGGAT TAGATGAGAA CTTAAAGCCA GAGCTGCAAG CCAGCTACTT AGCAGCTAAA GAGCAATATA TCAGTCCAGC AGATTTCTTT AAGCTAGAGG CAGGCAAGCA ACTCGCACCG CTGTGGCTAG CACCAAATGG CAAGGCCACC GACTATGACG CGCTAAATGA TGGCGGCGTG AGCGCTGAGT ATGGCGCCAT TGTCTTGCTT GGCGGCATTA AACAGATCGA CGCGCTCAAG GCGCGCTTTG CCCATGATGA AAGCGTACAA CTTATCGATA AAGTCGCGGA TATCTCCGCC GTCATGGGCC ATTACCGACT GTTAACCCTA AAGCTGTTAG CGCTCGCACT CGGTATCGCA CTCTTGTTGT TTAGCCTGAG TTTTGGCATT AAAAAAGCCG CGGTTGTCGT TGCCGTTCCA GCCCTTGCAG CCTTACTAAC GCTCGCAACC TTAGGGATAA CGGGCTCGCC ACTGAGCCTA TTCCATGCAC TCGCGCTTAT TTTAGTTTTC GGGATTGGCA TAGACTACAG CTTGTTCTTT GCCTCTGCTC AACAGCACGG CAAGGCAGTG ATGATGGCGG TATTTATGTC CGCCTGCTCG ACCCTATTAG CCTTTGGTTT ACTCGCCTTT AGCCAGACCC AAGCGATTCA TTATTTTGGT TTAACCCTGT CGCTAGGTAT AGGTTTTACC TTTTTACTTT CGCCACTGAT TTTAACGACT AAAAAGTCCT GA
|
Protein sequence | MASNFAVRAN QALIQSSPKW RLAIWLLVML SASLWTLQLW QNGARVQSDI LAMLPHLQQD KLTERALNQV EATLADQVYI ALVAKDETTA IAAAQLLMQK LETDLVATGK NAALTEIRSA DMQLGEALGQ YYFPHRFRLL TAPQAEALAT KDIGNLIEAA TAQLYNAFSY ANSNLLAQDP LLLFPANLLA LAPSSKVRAS QGILLANQGD NVAAVVMAKG QESAFNPNAQ LPQMTALTLG LDAVKQSYPD ITLLKAGALF HAIAATQTAK SEISILGLAS LLGVITLVWL AFRSVMPLLL AIVTISSGLL LAVTLTLSVF GELHLLTLVF GTSLIGIAID YSFHFYCERL SDTERNAKAT VAYIFPTVTL AFITSALAYV GIGLAPFPGM QQVAIFCAAG LLGAYLTLIL AYPLLAGGRL PSGSRPLALA GKYLANLTQL SNRLTTPLGM GMFALVIVVW CLVGATKLTV DDDIRHLQQS PASVTEPENQ LRQLLSGGTD NQFLLVRAAS EEALLQQLER VSPLLDAAIA HQELGNYVSL SRYLPSHQRQ DTAYRLQGEI YQTQIDTVLT SLGLDENLKP ELQASYLAAK EQYISPADFF KLEAGKQLAP LWLAPNGKAT DYDALNDGGV SAEYGAIVLL GGIKQIDALK ARFAHDESVQ LIDKVADISA VMGHYRLLTL KLLALALGIA LLLFSLSFGI KKAAVVVAVP ALAALLTLAT LGITGSPLSL FHALALILVF GIGIDYSLFF ASAQQHGKAV MMAVFMSACS TLLAFGLLAF SQTQAIHYFG LTLSLGIGFT FLLSPLILTT KKS
|
| |