| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0414 |
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| Symbol | |
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| ID | 5081398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 448536 |
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| End bp | 449576 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640497534 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001181945 |
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| Protein GI | 146291521 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACAGA GACGCCTGCA ACTTATGCAA TCACTTTTTG ACGAATATAT TGAGATGTAC
TCCTCACGGA ATGACAAGCT CACGACGCGT TTTAGCGATA ATTTTAGTGG TTATGCGGGC
AGTAGTGATG TTCTGATCAC GAATAAAGAA GAGTGGATAC GAATTACTCG CCAAGACTTT
GCACAAGTAC CAGAGCGGAT CCACATCGAA ATGCTAGATT TATCATTGCA GGATCTTGCA
GAGGATATCC TTGTTGTTAC CGCTTTTTTC CATATACATT TGCCGATCCC TGAATCAATA
CTCTGCCAAG AAACCGCAAG GTTAGTGCTC ATTTTTCATC AAGAAAACAA GGATTGGAAA
ATTGCCCATA GCGGCATATC TATCCCATAT GGTTTAGCCA ATAACGGGGA GATCTACCCC
ATGACGAGCC TAGAAGAAAG GAATCGCGAA CTTGAGTCTA TGATTGAAGC GCGCACCCGT
GAATTGGCAG AAGCAAACAG TCGATTAGAA AAACTGAGTA ACACAGACGG CTTAACCAAT
ATTGGTAACC GTAGGCTCTT TGACCATATA CTGCAAATGG AATGGAGCCG CGGACAACGC
AGCAGTGCAC CACTCGCGCT AATCATGCTC GATATTGACC ACTTTAAATT GTTTAATGAC
CACTATGGTC ATCTCGCTGG AGATGACTGC CTTAAACTAC TGGCTAAGGG GTTATCTCAG
TCAGGTCGTC GGGCGGGTGA ATTGGTTGCA CGCTATGGCG GTGAAGAATT TGTCATTTTA
CTCCCCAATA CAGATCAGCA AACAGCACTC GATACGGCGC AATACATTCA TCAACTTATC
CAATCGCTTG CTATCCCCCA TGTCAAAACC GACCTTGGTA CAGTCACTGT GAGTCTTGGT
GTCACCTGTA TAGAGCCCTC AGAGCAACAC AGCGCCTTAG AATTGGTACG CCAAGCAGAT
GCCGCGCTTT ATCTTGCCAA ATCGGCAGGT CGTAATTGTA TACGTTATAT GTCGCCATCA
GTGAACAAGC TTGAAACGTA A
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| Protein sequence | MRQRRLQLMQ SLFDEYIEMY SSRNDKLTTR FSDNFSGYAG SSDVLITNKE EWIRITRQDF
AQVPERIHIE MLDLSLQDLA EDILVVTAFF HIHLPIPESI LCQETARLVL IFHQENKDWK
IAHSGISIPY GLANNGEIYP MTSLEERNRE LESMIEARTR ELAEANSRLE KLSNTDGLTN
IGNRRLFDHI LQMEWSRGQR SSAPLALIML DIDHFKLFND HYGHLAGDDC LKLLAKGLSQ
SGRRAGELVA RYGGEEFVIL LPNTDQQTAL DTAQYIHQLI QSLAIPHVKT DLGTVTVSLG
VTCIEPSEQH SALELVRQAD AALYLAKSAG RNCIRYMSPS VNKLET
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