Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0397 |
Symbol | |
ID | 5081381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 430657 |
End bp | 431334 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640497517 |
Product | two component transcriptional regulator |
Protein accession | YP_001181928 |
Protein GI | 146291504 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAC TTTTAGTTGA AGATGATGCG ACGACGATTG ATTACATCGT CAAAGGATTT CTTGAGCAGG GGCACAATAT CGAAACGGCG AATGATGGCC ACCAAGGTTT ATCTCTCGCC ACAAGCTGTC AATATGATCT GGTGATCCTC GACCGAATGT TACCCCAGCT TGATGGCTTA AAATTATTGG CGGCTTTAAG GGCAACGGGT AATCAAACCC CTGTGCTGAT TTTGTCGGCT TTAGCCCATG TTGATGAACG GGTTAAAGGT TTGCGGGCGG GCGGTGATGA CTATATGACT AAGCCGTTTG CTTTTTCTGA ACTGTTAGTA CGCGCTGAAA AACTGATGCA ACGTGGTCAA TCCACGCCCA TTTCGACCGA CTTAGTGGTT GGTGGGCTCA AGATGGAATT ACTGACCCGC AATGTGACCT TGGACGGACA GGAGTTAATG TTGCAACCTA AAGAGTTTCA GTTGCTTAAG TATTTGATGG AACATGCTAA TCAGGTCATC AGCCGCACAC TATTATTTGA AGCTGTGTGG GATTATCACT TTGACCCTCG CACCAATGTA ATTGATGTAC ATATTGCAAA ATTACGGCGT AAATTTGAGG AGTTAGGTCA CGGAGAGCTG ATTGAAACCG TAAGGGGAGC GGGTTATCGC TTACGCCAAA GGCATTAA
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Protein sequence | MKILLVEDDA TTIDYIVKGF LEQGHNIETA NDGHQGLSLA TSCQYDLVIL DRMLPQLDGL KLLAALRATG NQTPVLILSA LAHVDERVKG LRAGGDDYMT KPFAFSELLV RAEKLMQRGQ STPISTDLVV GGLKMELLTR NVTLDGQELM LQPKEFQLLK YLMEHANQVI SRTLLFEAVW DYHFDPRTNV IDVHIAKLRR KFEELGHGEL IETVRGAGYR LRQRH
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