| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0384 |
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| Symbol | |
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| ID | 5081318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 417926 |
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| End bp | 419386 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640497504 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001181915 |
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| Protein GI | 146291491 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAATA ATGTTTGGAA TGAGCGAAGG AAGTTTATTT GGCTTTTATC TATATTGTTA
TTATTTGCTT TTTTAGTGAC CAGTAGCATC AGTTATAAAG TGGCTCACGA TTCGCTCAGC
CAACAAATTG AGAGCAATAC TTTACCTCTG ACGAGTGACA ATATTTACTC AGAAATTCAG
CAGGACTTGT TACGACCGAT CTTTATTTCA TCTTTGATGG CGCAGGATAC CTTTGTCCGT
GATTGGACCT TAAACCATGA ACAAGAGCCT GAAAAACTCA TTCGTTACCT TAAGGAAATT
CAAGAAAAAT ACGGCACAGT TACGAGTTTT TTTGTGTCAG AGAAGAGTCG AAATTATTAC
CATTCCACGG GTATTTTAAA ACAAATTCAA GATGTTGAAC CGGATGATGC TTGGTATTTT
CGGGTGCGAT CTTTACCTGA ATCCGAATAT TATGAGATTA ATATCGATGC CGATACGGCA
GACCGTAGTA AGACAACTGT ATTTGTAAAC TATAAAGTTT TTGATTTTGA AGGTAAATTT
ATTGGGGTGA CCGGTGTTGG CTTAGCCGTT GAGAAAGTCA AATTACTGGT AGAACTTTAT
CAAAAACGTT ATAACCGCCG CGTTTTTTTC ACGGATAGAT TAGGTAATGT CACATTACAT
GGTGATGCCT ATGATGGTTC GGATTCACTC CAGACCAGTA CTGGGCTAGA ACAATTGGCG
ACACGCATTT TAACGAGTCC GAGTGCGGCA TTTAGTTATA AGAAAAATGG AAAAACAGTT
TATCTCAATA GTCGTTTAGT ATCTGAATTT AAATGGTATT TGATTGTTGA GCAGGAAGAT
GCTCCCCAAG AACAAGATTT ACTTAACACT TTTTGGGGAA ATCTGGCGCT GAGTTTGATT
GTGACTATGG GTATTTTATT TATCTCAAAC ATGACCTTAG GTCGTTATCA GCGCAAGCTA
GAAATGATGG CGTCTACCGA TAAGCTCACT GGCGCCGCTA ACCGTCAGGT GTTTGAGGAG
TACTTTAGGC AGGCGTTAGA TAAAGCGAAG CTGACACAAT CACCCATTTC AATACTCTTG
CTGGATATCG ACCACTTTAA AAAAGTGAAT GACAGTTATG GGCATGGAAT GGGGGACTTA
GTGTTAAAAA CCATGGCTAA CATGCTACGT GGTTTACTAC AGCCGCAGGA TATCCTATGT
CGATGGGGTG GTGAGGAGTT TTTAATTTTG CTTCCAGAAA TGGACTTAAG TCGGGCTGCA
GAATTTGCGG AACAGATCCG TGACCTTATC TCTCTGCGGG AAATCAAAGT GAATGGATTA
CACATCTCTA TTACTGCCAG TATTGGCGTC GCAGAGCACC AAGCACAAGA GCCAGCGGAA
GATCTTATCA AACGTGCCGA TCTGGCCTTG TATCAGGCAA AAGCAGCGGG TCGAAATCAA
GTGGTATTGA ATCATCCATG A
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| Protein sequence | MGNNVWNERR KFIWLLSILL LFAFLVTSSI SYKVAHDSLS QQIESNTLPL TSDNIYSEIQ
QDLLRPIFIS SLMAQDTFVR DWTLNHEQEP EKLIRYLKEI QEKYGTVTSF FVSEKSRNYY
HSTGILKQIQ DVEPDDAWYF RVRSLPESEY YEINIDADTA DRSKTTVFVN YKVFDFEGKF
IGVTGVGLAV EKVKLLVELY QKRYNRRVFF TDRLGNVTLH GDAYDGSDSL QTSTGLEQLA
TRILTSPSAA FSYKKNGKTV YLNSRLVSEF KWYLIVEQED APQEQDLLNT FWGNLALSLI
VTMGILFISN MTLGRYQRKL EMMASTDKLT GAANRQVFEE YFRQALDKAK LTQSPISILL
LDIDHFKKVN DSYGHGMGDL VLKTMANMLR GLLQPQDILC RWGGEEFLIL LPEMDLSRAA
EFAEQIRDLI SLREIKVNGL HISITASIGV AEHQAQEPAE DLIKRADLAL YQAKAAGRNQ
VVLNHP
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