| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0371 |
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| Symbol | |
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| ID | 5081305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 403434 |
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| End bp | 404846 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640497491 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_001181902 |
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| Protein GI | 146291478 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.160254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATTA GTGAACAAGT GTGGATCCTC GACGATGATA GCTCGATACG TTGGGTGCTA
GAAAAAGCAC TTCAAGGGGC CAAACTCAGC ACCGCCAGTT TTGCGGCGGC AGAATCCCTG
TGGCAAGCCT TAGAAATATC CCAGCCTCGC GTAATAGTGT CGGATATTCG TATGCCGGGC
ACCGATGGGC TCAGCCTACT CGAACGGTTG CAAATCCATT ACCCGCATAT TCCCGTGATC
ATTATGACCG CACACTCTGA TTTAGACAGC GCTGTAAGCG CCTATCAAGC AGGGGCTTTT
GAGTATTTAC CTAAACCCTT CGACATTGAT GAAGCCATTT CCCTCGTCGA ACGCGCCCTT
ACCCATGCCA CTGAGCAAAG TCCTGCGCCA GTGCAAGAAA CACAGGTAAA AACCCCTGAA
ATCATTGGTG AAGCACCTGC AATGCAAGAA GTGTTTCGCG CTATTGGCAG GTTATCTCGC
TCGTCTATAA GTGTACTGAT CAATGGTCAA TCGGGTACGG GTAAAGAGTT GGTTGCTGGC
GCATTACACA AGCACAGCCC GCGTAAAGAT AAGCCGTTTA TCGCGCTGAA CATGGCTGCG
ATCCCTAAGG ATTTGATCGA ATCTGAGCTA TTCGGCCACG AAAAAGGTGC CTTCACTGGC
GCAGCCAATG TCCGCCAAGG TCGGTTCGAA CAAGCTAACG GCGGTACCCT CTTTTTAGAT
GAAATCGGCG ACATGCCGTT AGACGTGCAA ACACGGTTAC TCAGAGTGCT CGCCGATGGC
CAATTCTACC GCGTCGGTGG TCATAACGCA GTGCAAGTCG ATGTGCGTAT TATTGCTGCA
ACACACCAAG ATCTTGAGTT ATTGGTACAA AAAGGTGGCT TTAGGGAAGA CTTATTTCAT
CGACTCAATG TGATCCGCGT ACACTTACCT CCACTATCAC AACGGCGCGA GGATATTCCA
CAACTTGCGA CTCATTTTCT TGCTTCTGCC GCCAAGGAAA TCGGTGTTGA ACCAAAAATC
CTCACCAAGG AAACTGCAGC TAAACTTTCA CAACTCCCTT GGCCAGGTAA CGTACGACAA
CTTGAAAATA CCTGTCGTTG GTTAACAGTA ATGGCTTCAG GACAGGAAAT TTTGCCACAG
GATTTACCGC CTGAGTTACT TAAGGATCCC GTGAGCATCA CTCACGCGAC TAAAGTTGGC
CAAGACTGGC AATCGGCGCT AACCGAGTGG ATAGACCAAA AACTCTCTGA AGGAAATAGC
GATTTATTAA CCGAAGTACA ACCGGCCTTC GAACGCATAT TACTCGAAAC AGCGCTGCGT
CATACCCAAG GTCATAAACA AGAGGCGGCG AAACGTTTAG GCTGGGGGCG AAATACCCTA
ACGCGTAAAT TAAAAGAACT GTCGATGGAT TAA
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| Protein sequence | MRISEQVWIL DDDSSIRWVL EKALQGAKLS TASFAAAESL WQALEISQPR VIVSDIRMPG
TDGLSLLERL QIHYPHIPVI IMTAHSDLDS AVSAYQAGAF EYLPKPFDID EAISLVERAL
THATEQSPAP VQETQVKTPE IIGEAPAMQE VFRAIGRLSR SSISVLINGQ SGTGKELVAG
ALHKHSPRKD KPFIALNMAA IPKDLIESEL FGHEKGAFTG AANVRQGRFE QANGGTLFLD
EIGDMPLDVQ TRLLRVLADG QFYRVGGHNA VQVDVRIIAA THQDLELLVQ KGGFREDLFH
RLNVIRVHLP PLSQRREDIP QLATHFLASA AKEIGVEPKI LTKETAAKLS QLPWPGNVRQ
LENTCRWLTV MASGQEILPQ DLPPELLKDP VSITHATKVG QDWQSALTEW IDQKLSEGNS
DLLTEVQPAF ERILLETALR HTQGHKQEAA KRLGWGRNTL TRKLKELSMD
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