| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0289 |
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| Symbol | |
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| ID | 5081116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 304982 |
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| End bp | 306430 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640497406 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_001181821 |
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| Protein GI | 146291397 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000644129 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAGA AAGGTTTTTT CTCTTGGTTT CGTAAAGATA AGTCACAAGA TGAGGTCGTC
GCAGAAACGC CAGTTGTTAC TCCAACACAA GATACTGCTG ATGCAACAGA GCGTTTAGCA
CAGCAGGAAC AAGCTGAGGT GCAACTGGCT ATAGAGGTCG AAGCTCACGC TCATGCTGAA
AAACAGGCCG CGGAACAATT AACTGCCGAA CAAGCACAGG CAAAAACCGA AGCAGAGCAG
TTTGCCGTAG AGCACGCTCG AATTGAAGCG CTGGACTTCG CTAAACAGCA AGCCGAAGCA
ACACGTTTGG CCACAGAACA ACTCAGGGCC GAAAAGCATG CAGCTGAGGA CTTAGCCGTC
GCACAGTTAG CTGCAGAGCA ACGCATCGTA GAACAATTGG CAGCACAGCA GTTAGCGGCC
GAGAAAGCCG CTGCAGAGCA ACTAGCTCAA GCTGAAACTG CACAAGCTGT TGAGCCCGCG
GCCGAATTAC AACCAGAGCC GCAGGAAAGA CCCGTTAAGG AAGGATTATT TGCTCGCCTG
AAACGCGGCT TGATGCGTAC CAGCGAGAAT ATTGGCAGTG GTTTTATCGG CCTATTTCGC
GGCAAGAAAA TTGACGATGA TCTGTTTGAA GAACTCGAAG AACAATTATT AATCGCCGAC
GTTGGCGTCG AAACTACCAC GCGATTAATC AATAAGTTGA CTGAACATGC CTCACGTAAG
CAGCTTAAAG ATGCTGAGGC ACTATATGAT TTACTGCGTG ATGAGTTGCA AAAAACACTC
GATCCCGTCG CTATTCCGTT AGTGCCCAAT AATGCCAATG GCCCATTTGT TATCTTAATG
GTTGGCGTCA ATGGTGTGGG TAAAACTACT ACTATCGGTA AGTTGGCTAA ACAATATCAA
AGCCAAGGTA AGTCTGTGAT GTTAGCCGCC GGTGATACCT TCCGCGCGGC AGCTGTCGAG
CAATTACAGG TTTGGGGACA ACGCAACGAT ATTACCGTCG TCGCCCAGCA TACAGGTGCA
GACAGTGCCT CTGTATTGTT CGATGCACTG CAAGCCGCTA AAGCGCGTAA AGTCGATGTG
TTGATTGCTG ACACAGCGGG TCGCTTACAA AATAAAGCCC ATTTGATGGA AGAACTAAAG
AAAGTGGTTC GGGTGATGAA GAAGCTCGAC CCAGAAGCGC CGCACGAGGT CATGCTAACA
TTGGATGCGA GTACAGGCCA AAATGCGATA AGCCAAGCAC AGTTATTCCA AGAAGCCGTA
GGTGTTACAG GGCTTACTAT CAGTAAGTTA GATGGAACCG CAAAGGGTGG TGTGGTATTT
GCGATTGCCG ACAAGTTTAA TATTCCGATC CGTTACATAG GTGTCGGTGA GCAAATTGAT
GATTTGCGGA CTTTTAATTC AAAAGAATTT ATCGATGCCT TGTTCACTCA AGAAAAAGCG
GATAACTAA
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| Protein sequence | MAKKGFFSWF RKDKSQDEVV AETPVVTPTQ DTADATERLA QQEQAEVQLA IEVEAHAHAE
KQAAEQLTAE QAQAKTEAEQ FAVEHARIEA LDFAKQQAEA TRLATEQLRA EKHAAEDLAV
AQLAAEQRIV EQLAAQQLAA EKAAAEQLAQ AETAQAVEPA AELQPEPQER PVKEGLFARL
KRGLMRTSEN IGSGFIGLFR GKKIDDDLFE ELEEQLLIAD VGVETTTRLI NKLTEHASRK
QLKDAEALYD LLRDELQKTL DPVAIPLVPN NANGPFVILM VGVNGVGKTT TIGKLAKQYQ
SQGKSVMLAA GDTFRAAAVE QLQVWGQRND ITVVAQHTGA DSASVLFDAL QAAKARKVDV
LIADTAGRLQ NKAHLMEELK KVVRVMKKLD PEAPHEVMLT LDASTGQNAI SQAQLFQEAV
GVTGLTISKL DGTAKGGVVF AIADKFNIPI RYIGVGEQID DLRTFNSKEF IDALFTQEKA
DN
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