| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0219 |
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| Symbol | |
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| ID | 5079145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 238827 |
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| End bp | 239708 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640497339 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001181754 |
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| Protein GI | 146291330 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4936] Predicted sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.882333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAACG CCCACGATAT ACTTGACAAT ATTGTATATG ATTTTGCCAA TGCCACAGGT
CTGGGTTCTG TTGCCGTAGA TCTGAATGGC AAAGAGATAT CCCCATGGTA TAATTTTACT
TCTTTCTGCC AGCAGGTCAG GCAAATCGCA GCTTACCATC CCTATTGCCA ACAATGCGAT
CGCTGTGGTG GTTTTGAAAG TACGAAAGCA AAACAGATTC AATGTTATCG CTGTCACGCA
GGACTCGTAG ATTTTTCCAT TCCTATTTTC ATTAACGGTA ATCTGACAGG GTTTGTTTCT
TGTGGACAAG CACGTGTTGC AGAAAACTTA CCATTACCAA AAATAGTGGA AAACGATAAA
AACTTACCAA CAGAATCAAA ACTTATCGAA CTATATCATG AGGTGCCTGA ACTGAGCCTG
ATGAAAATAA AGTCTGCTGC ACAGCTCCTG AACCTTATTA TAGAGAACTA CCTTAGTAAG
GAATATAATT TACGTATAGT AAAAAATGTC AGTCCTGTTA AAAATCAGAA ACTGGAGACA
TTGGGTCGAC ATCAGGCAAC AATGGAAATG ATACTCAATC ACATAAATCA GAATTTCTCT
GACAATCTCA ATCTTGAACA AATGGCCAGC AAAGCCAACC TGAGTATGTT TTATTTTTCC
AGAACGTTTA AGGAGTTGAC AGGCACAGGC TTCACTGCTT ATTTAATAAA TAAAAGAATG
ACGGAAGCTC ATTGTCTCCT TGAACAAACA AACTGGAGCA TTGAAAAAAT AGCACGAAGT
GTCGGTTATA ATGATGTCCA TTATTTTTCC CGTCTCTTTA AGAAAACGTT CAATAGGTCT
CCATCAGAAT TCCGAAATCA TTCTTCAGGC TTTTCCATGT AA
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| Protein sequence | MRNAHDILDN IVYDFANATG LGSVAVDLNG KEISPWYNFT SFCQQVRQIA AYHPYCQQCD
RCGGFESTKA KQIQCYRCHA GLVDFSIPIF INGNLTGFVS CGQARVAENL PLPKIVENDK
NLPTESKLIE LYHEVPELSL MKIKSAAQLL NLIIENYLSK EYNLRIVKNV SPVKNQKLET
LGRHQATMEM ILNHINQNFS DNLNLEQMAS KANLSMFYFS RTFKELTGTG FTAYLINKRM
TEAHCLLEQT NWSIEKIARS VGYNDVHYFS RLFKKTFNRS PSEFRNHSSG FSM
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