Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0156 |
Symbol | |
ID | 5078982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 180847 |
End bp | 181659 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640497276 |
Product | hypothetical protein |
Protein accession | YP_001181691 |
Protein GI | 146291267 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTAAAC AAGCCGTTGC TGCTGAAATC AGAACAACAA CCAATGAACG TGGTGTTTTT ACTTATGGTA ACGACACTAT TCACTATGAT GTTATTCGTA AAACCAAGCC TTCTGAAAAT GCTAAAAAAA CGGCACGCAA AGTCATTATT AAGGTTCACC CTGATCAGCG TGTTGTGGCT ACTGTGCCAC ATGATGCAAG TGATGATGCT ATTCAAGATG CCATGCATAA GCGTGCCAGA TGGATTTGGC AAAGCATTGA TGAATTTGCT AAGCAAAAAG ATACGGTATT ACCCAAATGC TACGAGAGCG GTGAAACTCA GTTTTATCTA GGCAAGCGCT ATGTACTCAA GGTAATTGTT GATGCCAAGC AAGTACCTAA CGTAAAGCTA AGCCGTGGCA AATTGAACGT AACAATCAAG CATGAAGTAA GTAAAGATAT TGATGATCGG TTGGTGAAAA TTAAACCGCT AATCGACAAG TGGTATCAAC ACAAAGCTAA AGCCATTTTT CATGAGCGAC TAGCCGAATT ACTTCCGAAA GCGACTTGGG TAACAGGTAT TCCTTCATTT CGTGTAATGG CAATGAAAAA GCAATGGGGA AGCTGCTCAA CCAAAGGCAA CTTGATGCTC AACCCTCACC TCGTTAAAGC ACCGAAAGAA TGCATTGATT ACGTGATACT ACATGAGCTT TGCCATATTG CAGAACACAA CCACAGCGAG CGCTTCTGGC GTTTATTAAC CCAAGTAATG CCAAACTGGA AAGAAGTAAA AGCCAAATTA GATGACATGG CGGAGATGTA TTTGAATGAG TGA
|
Protein sequence | MSKQAVAAEI RTTTNERGVF TYGNDTIHYD VIRKTKPSEN AKKTARKVII KVHPDQRVVA TVPHDASDDA IQDAMHKRAR WIWQSIDEFA KQKDTVLPKC YESGETQFYL GKRYVLKVIV DAKQVPNVKL SRGKLNVTIK HEVSKDIDDR LVKIKPLIDK WYQHKAKAIF HERLAELLPK ATWVTGIPSF RVMAMKKQWG SCSTKGNLML NPHLVKAPKE CIDYVILHEL CHIAEHNHSE RFWRLLTQVM PNWKEVKAKL DDMAEMYLNE
|
| |