Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0149 |
Symbol | |
ID | 5078975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 172225 |
End bp | 175374 |
Gene Length | 3150 bp |
Protein Length | 1049 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640497269 |
Product | CzcA family heavy metal efflux protein |
Protein accession | YP_001181684 |
Protein GI | 146291260 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAT ACATTATCGA AGCCTCCATC AGACAACGAC TTATGGTGTT GATCATCGCC ATCATGATCA CCGTCTGGGG CGTACAAGAG TTGCGCAAAA CGCCACTCGA TGCATTGCCC GATCTGTCGG ATGTGCAGGT GATTATTAAA ACGTCCTACC CAGGGCAAGC GCCTAAATTG GTAGAAGAAC AAGTCACTTA TCCTTTATCT ACCGCCATGT TAGCCGTACC CGGTGCCAAG ACGGTTCGGG GATTCTCGAT GTTTGGTGAC TCCTATGTCT ATGTGATTTT TGAAGATGGC ACCGACATCT ACTGGGCGCG ATCACGGGTA TTGGAATACT TAAATCAGAT CAGTAGCCGC TTGCCACAGG GCGTACAACC GTCACTTGGC CCAGATGCCT CTGGTGTTGG CTGGGTGTAT GAATATGCAC TGGTCGATCG CTCGGGCAGT TTAGATTTAT CGCAGCTCAA AAGCCTGCAG GACTGGTATC TTAAATTAGA GCTACAAAGC GTGGCTGGCG TGTCTGAAGT CGCAACCGTC GGTGGCATGG AGCAGACCTA TCAGATTGTG CTCGAACCCG ACAAAATGGC GATCTATAAA CTGGATATCG CCAGCATTAA AGATGCGATA GAAAAATCTA ATAGCGAAGC GGGTGGCTCG GTCATTGAGA TGGCTGAAGC CGAGTATATG GTGCGCGCCA AAGGGTATCG TCAAACCCTT GAGGATTTCC GCGAAATTCC ATTAGGCATC ACCAGTCCTT CTGGCACAGG TCTATTACTG AAAGATGTTG CTACCGTGCG CAAAGGCCCG GCCTCACGCC GCGGTATAGC CGAACTCGAT GGTGAAGGTG AAGTCGTAGG CGGCATTATT GTGATGCGTT ACGGCGAAAA TGCTTTATCC ACGATTGATG CCGTAAAAGC TAAGCTTGAA GAACTGAAAG CTGGTTTACC CGATGGGGTT GAAATCATCC CCACCTACGA CAGATCCCAA CTCATTCTAA AATCCGTTGA TAACCTGTTC AGCAAAGTTG TCGAAGAGAT GCTGGTCGTA GGGCTGGTCT GTCTGCTGTT TTTACTGCAT GCACGCTCAA CCTTAGTCGC CATCATTACC CTGCCGCTTT CAATCCTGAT TGCCTTTATC GTAATGAATA AGATGGGGGT GAATGCCAAC ATTATGAGTC TTGGGGGTAT CGCGATTGCC ATTGGCGCGG TGGTGGACGG CGCAATTGTG ATGATTGAAA ACCTGCACAA ACATTTGGAG CAGTTTCACA CTGAACACAA CCGAGAACCC GATACCAAAG AACACTGGCG GATCGTCACC GAAGCCTCGA TTGAGGTTGG CCCAGCACTA TTTTTCTCTT TAATTATTAT TACCTTAAGT TTTGTACCTG TGTTTGCACT CGAAGCACAG GAAGGCCGTT TATTTGCGCC GCTGGCCTAT ACCAAATCCT TTGCTATGGC CGCTTCCGCA TTATTAGCAA TCACATTAGT GCCAGTCTTA ATGGGCTATT TTATTCGGGG AAAAATTCCG AGTGAGCATA AAAATCCCAT CAGTCGCGTG CTGATCGCTT TATATAAGCC ATCGCTTAAT CTGGTACTTA GGTTTCCTAA AATCACCTTA GCATTAGCGT TGATTGCCTT AGTCAGCGCT TGGTATCCGA TGACGCGCAT GGGCAGTGAG TTTATGCCCG AGTTAGAAGA AGGCGATTTA CTCTACATGC CAACCGCGTT ACCAGGACTC AGTGCGGGCA AAGCCGCCGA AGTGTTACAG CAAACCGATC GTTTGATTAA AACCGTCCCC GAAGTCGCCC GCGTATTTGG TAAGGTGGGC CGCGCCGAGA CTGCGACTGA TCCCGCGCCG TTAACTATGC TCGAAACCAC CATCATGCTT AAACCACATG AAGAATGGCG CGAGGGTATG ACCTTAGATG GCATCATCGC TCAACTGCAA CAAACGGTGA AAGTGCCGGG TATCACGAAT GCTTGGGTTC AACCCATCAA AACCCGTATC GATATGCTCT CGACTGGAAT AAAAACCCCC GTTGGCATTA AGATCACCGG CGCCGATGTG AACGAACTAC AAAGCCTAGG AGCTGAAATA GAGGCCATTC TCAGTAGAGT GCCACACACT AAGTCGGCCT ATGCCGAACG CAGTGGCGGC GGGCGTTATA TCGATATCAC CCCAAAACTC GATGTGGCTG CACGTTACGG TATGTCATTG CAGGATATTC AAGATGTAGT ACGTTACGCC ATTGGCGGTA TGGATATTGG TGAATCGATA CAAGGGGCTG AGCGTTATCC CATCAACCTA CGTTATCCCC GTGAGCTACG CGATAATATC GAGAAGCTAC GTGAACTCCC TGTGATCACT AAATCGGGAA ATTACCTGCC ACTGCGAAAT TTAGCGGATA TCGAAATCAC CGATGGCGCA CCTATGCTCA CCAGTGAAAA CGGTCGCTTA ATCTCTTGGG TGTTTATCGA TATTGAAGGC ACGTCTATCG GCGAATATAT TACTACTGCC AAGCAAGCAT TAACTGCCGA ACTTAAAGTG CCCCCGCGCT ACAGCTATAC CTTCGCAGGC CAGTATGAAT ATATGCAACG GGTAGATGCA AAACTGAAGC AAGTGATCCC TATGGCCTTA GGTGTGATAT TCATCCTGTT GATGATGACA TTTGGCTCTA CTTTGCAGGC GAGTATTATC ATGCTCAGCC TCCCATTCGC GCTAGTCGGC AGCACTTGGC TATTGTATCT ACTGGATTAC AACATCTCAG TCGCCGTCGC AGTCGGTATG ATTGCGTTGG CGGGCGTTGC CGCTGAGTTT GGGGTAATCA TGCTGATTTA CCTTAATAAT GCGATTAAGC ACAGGCAAGA TAAGAATAAC TACCATACAG TTACCGATCT CAAAGAAGCT TTAATTGAAG GTGCTGTTAT GCGTATTCGC CCCAAAGCGA TGACAGTCGC CACTATCTTT TTTGGCCTAC TGCCCATTAT GTGGGGCGCA GGTTCGGGGA ATGATGTGAT GCAAAAAATC GCCGCACCTA TGGTTGGTGG TATGGTCACA GCACCAATCC TGTCGCTCTT TGTGCTGCCC GCACTTTATC TATTAATTTA CTCTCGTCAG TTAAAGAAAG AAGCTGCACC AATAAGTTAA
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Protein sequence | MLKYIIEASI RQRLMVLIIA IMITVWGVQE LRKTPLDALP DLSDVQVIIK TSYPGQAPKL VEEQVTYPLS TAMLAVPGAK TVRGFSMFGD SYVYVIFEDG TDIYWARSRV LEYLNQISSR LPQGVQPSLG PDASGVGWVY EYALVDRSGS LDLSQLKSLQ DWYLKLELQS VAGVSEVATV GGMEQTYQIV LEPDKMAIYK LDIASIKDAI EKSNSEAGGS VIEMAEAEYM VRAKGYRQTL EDFREIPLGI TSPSGTGLLL KDVATVRKGP ASRRGIAELD GEGEVVGGII VMRYGENALS TIDAVKAKLE ELKAGLPDGV EIIPTYDRSQ LILKSVDNLF SKVVEEMLVV GLVCLLFLLH ARSTLVAIIT LPLSILIAFI VMNKMGVNAN IMSLGGIAIA IGAVVDGAIV MIENLHKHLE QFHTEHNREP DTKEHWRIVT EASIEVGPAL FFSLIIITLS FVPVFALEAQ EGRLFAPLAY TKSFAMAASA LLAITLVPVL MGYFIRGKIP SEHKNPISRV LIALYKPSLN LVLRFPKITL ALALIALVSA WYPMTRMGSE FMPELEEGDL LYMPTALPGL SAGKAAEVLQ QTDRLIKTVP EVARVFGKVG RAETATDPAP LTMLETTIML KPHEEWREGM TLDGIIAQLQ QTVKVPGITN AWVQPIKTRI DMLSTGIKTP VGIKITGADV NELQSLGAEI EAILSRVPHT KSAYAERSGG GRYIDITPKL DVAARYGMSL QDIQDVVRYA IGGMDIGESI QGAERYPINL RYPRELRDNI EKLRELPVIT KSGNYLPLRN LADIEITDGA PMLTSENGRL ISWVFIDIEG TSIGEYITTA KQALTAELKV PPRYSYTFAG QYEYMQRVDA KLKQVIPMAL GVIFILLMMT FGSTLQASII MLSLPFALVG STWLLYLLDY NISVAVAVGM IALAGVAAEF GVIMLIYLNN AIKHRQDKNN YHTVTDLKEA LIEGAVMRIR PKAMTVATIF FGLLPIMWGA GSGNDVMQKI AAPMVGGMVT APILSLFVLP ALYLLIYSRQ LKKEAAPIS
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