| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0136 |
|---|
| Symbol | |
|---|
| ID | 5078962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 157399 |
|---|
| End bp | 157842 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640497256 |
|---|
| Product | excinuclease ABC subunit C |
|---|
| Protein accession | YP_001181671 |
|---|
| Protein GI | 146291247 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2827] Predicted endonuclease containing a URI domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGATT TAGCCATTGA GACAGCAAAT CCAGATCACT TGGCTAGCTC TGAGCAAAGG
GCTAGCCAAG CTCAAGCTGT TAACAATGCT CAGCTTTCTT GTAAGTCAGA AGCGCTAGGA
GCTGAGCAAG CTGTTACTTC GGAGCAAGGC GCGACGTCAG AGATAGTGCA AGCATCAACG
TGGTATCTGT ACCTTATCCG CTGCGCCAAT GGCCACTTAT ACACCGGCAT CACCACAGAT
GTCGCACGCC GCTTTAACGA GCATCAATCA AGCAGCCCCA AAGCAGCAAA GTATCTGCGC
GGCAAAGGGC CATTAACCCT GATGTATCAA GAACAAGTCA GCACTCGCAG CGATGCACTG
CGCCGTGAAA TAGCAGTTAA AAAGCTAAGC CGTAATCAAA AGTTGGCGTT GATTGAGTCA
GAGCGTGGAT TACTAGAGCG TTAA
|
|---|
| Protein sequence | MTDLAIETAN PDHLASSEQR ASQAQAVNNA QLSCKSEALG AEQAVTSEQG ATSEIVQAST
WYLYLIRCAN GHLYTGITTD VARRFNEHQS SSPKAAKYLR GKGPLTLMYQ EQVSTRSDAL
RREIAVKKLS RNQKLALIES ERGLLER
|
|---|
| |