Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0100 |
Symbol | |
ID | 5078875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 114456 |
End bp | 115235 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640497220 |
Product | hypothetical protein |
Protein accession | YP_001181635 |
Protein GI | 146291211 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCCA TTTTATTGGT TAGAAGACAG CCTGTGACTC CGATTTTTTT TAATCAGCAA TACCCAACAC TGGTGGACAT ATGTGCGCGC TGGCAACTGA TTTATGATGC CAATGCACCC TTCGAATTAC GTTTTGAATC GGACAGCTTA ACGCTACATA AGCGCGATGA GCCTAAACTC GATGGCATAT TAGTCGATTT TGTCACTGGC GCCGTTGCTC ATCGTCGCAA ATTTGGTGGT GGCCGCGGAC AATCTATAGC TAAGGCTGTT GGCTTAAAGC AAGGGGTAAC ACCAAGTGTG GTTGATGGTA CAGCGGGTTT AGGGCGCGAT GCATTCGTAC TTGCCAGCTT AGGTTGTACT GTGACTATGG TCGAGCGTCA TCCTGTCGTG GCTGCCTTGT TAGAGGACGG GTTACGGCGC GCCTATCAAG ACGCTGAAAT CGGCGATTGG ATGCATGAGC GGATGCAGCT ATTTCATGGT TCAAGCCTTG AAGCCTTATC AAAACTGGAA CAAGAGGTGG ATGTGGTTTA CCTCGATCCT ATGTATCCCC ACCGTGATAA GTCGGCACTC GTTAAAAAGG AAATGCGGGT ATTTCAATCT TTAGTGGGCG CCGATTTAGA TGCCGATGGT TTGCTCGCTC CCGCTTTAGC ATTAGCAACT AAACGTGTCG TCGTTAAGCG CCCTGATTAT GCCGAAGATT TGGATGGGGT GAAGCCTAGT ATGGTTATCG ACACGAAAAA AAATCGCTTC GATGTTTATG TAAAAGCCGC AATGAAATAG
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Protein sequence | MTAILLVRRQ PVTPIFFNQQ YPTLVDICAR WQLIYDANAP FELRFESDSL TLHKRDEPKL DGILVDFVTG AVAHRRKFGG GRGQSIAKAV GLKQGVTPSV VDGTAGLGRD AFVLASLGCT VTMVERHPVV AALLEDGLRR AYQDAEIGDW MHERMQLFHG SSLEALSKLE QEVDVVYLDP MYPHRDKSAL VKKEMRVFQS LVGADLDADG LLAPALALAT KRVVVKRPDY AEDLDGVKPS MVIDTKKNRF DVYVKAAMK
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