Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0099 |
Symbol | |
ID | 5078874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 111971 |
End bp | 114235 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640497219 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001181634 |
Protein GI | 146291210 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTTTCAAT GGCTTAAAGG TTTTTTATTT ATCAGGGAGC AAGATTTCTT AAATCCTGAT AGAGAATTAT TAAAAACCAG CTTACTACGG ATTATTTTGC TCAGTGGTGC CATCTTAACC ACCAGCATTG TGCTGCACAG TTCTTTAATG GCCTATCAGC TAAATCTTAG CTTTGTCATT ATTATCACCG TCAGCTTTTT GAGTGTGCTG ATCTCTGCTT TGTGGTTCAC CCGCCGATAT TTGATGCTCA GTTCAATCAG CCTGTTGGCT ATGGTTGTCG CAGCCTGCAT ATGCATCTTG TTGTTTGTTC CTGATTTTAA TTTGTCGCAA GCAGGCATTA TTTTTTTATA TACCCTACCT CTGATGGCAC TTTTTCTCTT TGGGGCAAAA GCTGCCATCA TAATGATGTT TTTCAATGTA TTACCCTTTT TACTGCTACT GCAAAATCGT AACCTCCCGA CGATTATCGA TATTGATATC AGTATGCCTG CAACCCATGC CTACCTAAAT GGCTTGCTGT TTACGTTTTT TAATATCTGT ATTCCTTTGT CGGCAATGCG GCTATTAAAA ACTCAAAAAA TTCATTCGCA GCAGATGATT AAGCACCATG AGGCACTGCA ACACACACTA GAGCAATACA CTGAAATATT TGAAAATAAT GGCACGGCCT CTTTCTTTTG TAATGAAGAT GGGCTGATTC TCAACCTAAA TGATGCAGCA AAAAATATCG CCAACGATGT CAGGGTAAAC CAGACTCGAC TATCTGATAT TTTTGAACTG GCGGAAGATA CTCCCATCAA TTTGTTTGCA GCATCTTTCC CTACACATTT AAAAAACAAC CCTAAAGCCA AATACTTACT ACAAAAAGCC TCATTACAGC ATCACGATAC TTTACTGTTT CACTGCCATG ATGTTACCGA ACAGGCAAAT CATGCAATTG AATTAAGCCG ACTTAAAAAA CACCATATCA GCACACATTT TTATGACTTA GTCACCAGTC TGCCAAACGA AAATCATTGG TATAACCCTG CGCCGAGTGT TATCCATCAA AAAATGACTG TTGCGATTGT CAAAATTGAT AACCTTAGCC AAATTAATGC CGCGTTCGGC ATTCAAATAG GAGATGCCCT GCTCAAAATC TTTGCAAATG AGCTAAAACA GCGTTTTGGC CAACATGCAA AAATATACCG CTTTAGGGGA GCCTCCTTCG CGCTTGAATT TACCAGTTTG CCGCTCATTT CCCCTGAAAA TCTCGCTCAA CAATTGCGTG AACGTATTCC GACCAACTTA CAACTTAAAC AAAAACGACA AGTTGAATAC CATCTCGAAT GCCGTGTTGG TTGCAGTTCA GGCACAAAAG CCTCACCACA GCAAGCTGCA GAACAATGCT TAATTGCTAT AAAACAAACG ACTCAAGCAA GCCCTGTGAT GGTGTATTAC ATCGGCCTTA TCAATAATTT ACTCGAAGCA TCATCACAAA AAGCAAGGAT CCGAGACGCC CTAAAATACA ACCGCCTCGA AATGTGGCTA CAACCTCAGG TGATGGCTAA CGGCCATATT ATAAGTTTTG AAGCTCTTGC CAGAATGTTC GACGAAGATG GCACAATGAT AATGCCCAAT ACATTTATCC CCATTATTGA GTCATCCCAA CTACAGGCTA TCTTTGCCAT AAAAGTGTTC CGACAATTAC TACAGTTGAT CCGTTCTTGG CCTAAAAATG TGCCGCCGGT GAAGATTGCT TTCAACCTAT CAGGACAGGA TATTCTGTCG GATCGATTCT TTAAGGTGCT GATACAGACC TATATGAATC ACCCTGAGCT TATCCCATTA TTAGAAATTG AAATCACCGA AACATCAGTG TTTTCAACCT ATAAAGAAAC TGGGCGCCGT CTTAACACCC TTGCACGAAT GGGTGTATCT ATCGCAATTG ATGATTTTGG TACTGGGCAT GCGTCATTGA GCCAACTTAT CGATATCAGC GCAGATACGA TTAAAATCGA TCGCTACTTT ATCAGCCAAC TTGGGATTAG CGAGCGCCAT ACCCAAATTG TGAATGCGGC TATCCTATTA GCAAAGAGTT TAAAATTGAA CGTCATTGCC GAGGGGATTG AAACTGAGGC CCAACTGTCG CAACTCACCG CTTTAGGCTG TAAGCAATTT CAAGGTTATT TATTTGGAAA ACCCGCCCCA GCCAATCTTT GGCTGAAAAC CTTTCAAATG CAAACTCCCA TGCACTGGTT CCCTGATAAA AAAAGTGCCA ACTAA
|
Protein sequence | MFQWLKGFLF IREQDFLNPD RELLKTSLLR IILLSGAILT TSIVLHSSLM AYQLNLSFVI IITVSFLSVL ISALWFTRRY LMLSSISLLA MVVAACICIL LFVPDFNLSQ AGIIFLYTLP LMALFLFGAK AAIIMMFFNV LPFLLLLQNR NLPTIIDIDI SMPATHAYLN GLLFTFFNIC IPLSAMRLLK TQKIHSQQMI KHHEALQHTL EQYTEIFENN GTASFFCNED GLILNLNDAA KNIANDVRVN QTRLSDIFEL AEDTPINLFA ASFPTHLKNN PKAKYLLQKA SLQHHDTLLF HCHDVTEQAN HAIELSRLKK HHISTHFYDL VTSLPNENHW YNPAPSVIHQ KMTVAIVKID NLSQINAAFG IQIGDALLKI FANELKQRFG QHAKIYRFRG ASFALEFTSL PLISPENLAQ QLRERIPTNL QLKQKRQVEY HLECRVGCSS GTKASPQQAA EQCLIAIKQT TQASPVMVYY IGLINNLLEA SSQKARIRDA LKYNRLEMWL QPQVMANGHI ISFEALARMF DEDGTMIMPN TFIPIIESSQ LQAIFAIKVF RQLLQLIRSW PKNVPPVKIA FNLSGQDILS DRFFKVLIQT YMNHPELIPL LEIEITETSV FSTYKETGRR LNTLARMGVS IAIDDFGTGH ASLSQLIDIS ADTIKIDRYF ISQLGISERH TQIVNAAILL AKSLKLNVIA EGIETEAQLS QLTALGCKQF QGYLFGKPAP ANLWLKTFQM QTPMHWFPDK KSAN
|
| |