| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0040 |
|---|
| Symbol | |
|---|
| ID | 5078767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 48094 |
|---|
| End bp | 49638 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640497160 |
|---|
| Product | phosphoglyceromutase |
|---|
| Protein accession | YP_001181575 |
|---|
| Protein GI | 146291151 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0696] Phosphoglyceromutase |
|---|
| TIGRFAM ID | [TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAA CTAAACGTCC GATCGCGCTG TTGATCCTCG ATGGCTGGGG CTACCGTGAA
AACACGCACA TGAACGCGAT TTTTCACGCC AAAACACCAG TGCTCGACCG ACTCAACGCT
CAATATCCCC ACGGTTTGAT TTCTGGCTCA GGCTTAGATG TAGGTTTGCC CGATGGTCAA
ATGGGCAACT CTGAAGTAGG CCATATCAAT TTAGGCTCTG GCCGCATTGT CTATCAAGAG
CTTACTCGCA TCAGTAAAGC GATTAGCGAC CATGAGTTTG AGACAAACCC AGCCCTATGC
GATGCCGTTG ATTCGGCAAT TAATGCTGGC GGCGCGGTAC ACATTATGGG CTTACTTTCT
CCCGGTGGTG TACATAGCCA TGAAGAGCAT ATCGAAGCCA TGTGCCGCAT GGCCGTTGCA
CGCGGTGCAA CCAAGGTCTA TTTACACGCG TTCTTAGATG GCCGTGACAC ACCACCCCGT
AGCGCTAAAG CTAGCTTGAG TCATTTTGAT GATCTGTTTA CTACATTAGG CCATGGCCGT
GTCGCATCAA TCATAGGCCG TTACTTTGCA ATGGACCGTG ATAACCGTTG GGATCGTGTA
TCCCAAGCCT ATGAGTTAAT CACCCAAGGT AAGGCTAAAT TCCAATACGA TAACGCTGTG
ACGGCGTTAG AAGCCGCATA TGCCCGTGAT GAAAACGACG AGTTTGTGTC TTCATCGGCC
ATTACCGATG TCGATGGTAA AGTAGCAACA CTACAGGATG GCGACGCACT AATATTTATG
AACTTCCGCG CTGACCGCGC CCGCCAAATT ACCCGTAGCT TTATTCACCC AGACTTTGAT
GGTTTCGAAC GCGCAGTTGT GCCTAAAATG CACTTTGTCA CCCTCACTGA GTACGCTGGC
GACATAACGG CACCTATCGC TTATCCATCC GAAAACTTAG TGAATACTTT AGGTGAAGTA
CTGCAAAATC GTGGTCGTAC ACAGCTACGG ATCTCTGAAA CAGAAAAGTA TGCCCATGTC
ACTTTCTTCT TCAACGGCGG TAAAGAAGAA CCATTTGAGG GCGAAGATCG CATCCTAATC
AATTCACCTA AAGTGGCAAC TTACGATCTA CAACCAGAGA TGAGTTCAAC CGAGCTGACT
GATAAGTTAG TTGCAGCAAT TGAATCAACA AAATACGATG TGATCATCTG TAACTACCCC
AATGGCGATA TGGTTGGCCA CACGGGTAAC TTCGATGCCG CAGTCAAAGC CTGTGAAGCG
GTTGATACTT GTATTGGCCG CGTTGTCGAA GCACTGGCTA AAGTGGGTGG TGAATGTATT
ATTACCGCCG ACCACGGTAA CGCAGAGCAA ATGACTGACG AAACCACAGG TCAAGCCCAT
ACTGCCCACA CCAGTGAACT GGTGCCTTTT ATCTTTGTTG GACGCGATGC GACTATAGAT
AAAGGTGGTA AACTCAGCGA TGTCGCACCG ACCATCTTGC AGTTAATTGG TGAAACTATT
CCTGCAGAGA TGACGGGCAA ACCCTTAATC CACATTAAAG AGTAA
|
|---|
| Protein sequence | MTTTKRPIAL LILDGWGYRE NTHMNAIFHA KTPVLDRLNA QYPHGLISGS GLDVGLPDGQ
MGNSEVGHIN LGSGRIVYQE LTRISKAISD HEFETNPALC DAVDSAINAG GAVHIMGLLS
PGGVHSHEEH IEAMCRMAVA RGATKVYLHA FLDGRDTPPR SAKASLSHFD DLFTTLGHGR
VASIIGRYFA MDRDNRWDRV SQAYELITQG KAKFQYDNAV TALEAAYARD ENDEFVSSSA
ITDVDGKVAT LQDGDALIFM NFRADRARQI TRSFIHPDFD GFERAVVPKM HFVTLTEYAG
DITAPIAYPS ENLVNTLGEV LQNRGRTQLR ISETEKYAHV TFFFNGGKEE PFEGEDRILI
NSPKVATYDL QPEMSSTELT DKLVAAIEST KYDVIICNYP NGDMVGHTGN FDAAVKACEA
VDTCIGRVVE ALAKVGGECI ITADHGNAEQ MTDETTGQAH TAHTSELVPF IFVGRDATID
KGGKLSDVAP TILQLIGETI PAEMTGKPLI HIKE
|
|---|
| |