Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0022 |
Symbol | |
ID | 5081497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 27804 |
End bp | 29093 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640497138 |
Product | sun protein |
Protein accession | YP_001181557 |
Protein GI | 146291133 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACTTGC GCGCGCTGGC TGCGAAAGCC ATCTTCGAAG TATTAGAAAA AGGCGTGTCA CTGTCAGTGG CATTGCCTGA GCAGCAGAAA CATCTTGCCA GTGGTAAAGA TAAAGCCCTA CTCGCCGAGC TTTGCTACGG TGTGATGCGT ACTCTGCCAC AAATAGAGAA ACGCATCAGT GAATGCCTAG AGAAACCACT CAAGGGTAAA CAAAGGATTA TCCACCAGCT ACTGATTGTA GGTTGCTATC AACTGTACTT TACCCGTATT CCAAGCCATG CCGCAATTTC AGAAACCGCC GAAGCCTGTC GCCAACTAAA ATTTGAAGGC ATGGTCAAAG TGGTTAATGG TGTACTGCGC AACATTCAGC GCCAGCTTTC GCCACTGAGC ACTGAATCAG ACACCTTAAG CTACAACACA CCAGCTTGGT TGATTAAGCG CTTAAAAGAA GCCTATCCCG AGCAGTGGCA AGACATCATT CAACAAAGCC ATGAACGCCC ACCGATGTGG CTGCGTAACA ATCGCTTATC CCAGAGCCGT ACCGAATACC TTGCAGCCTT AGCCGAACTC GACATTGAAG CGAGCGAAGG CAGTAGTGCT GATGCCATTC TCTTAGCCCA TCCAAAGGAT GTCGCCACAC TGCCACGCTT CCATGAAGGC GCGGCATCAG TACAAGATGG CGCAGCGCAA TGGGCGGCGA CCTTACTCGC CCCACAAGCT AATGAGTTAA TACTCGATGC CTGCGCGGCG CCAGGTGGAA AAAGTTGCCA TTTACTCGAA GTTGAACCGA ACATCAAATT AGTCGCTGTT GATTTTGATG CCAAACGCCT TGAGCGGGTG CAACAGAATC TTGATCGCCT ATCATTAAAA GCGGAGCTTA TCCATGGCGA TGCGGCCAAT ATTGGCTCAT GGTGGCAAGG TGGACTATTT GATCGTATCT TACTGGATGC CCCCTGTTCA GCCACAGGGG TGATCCGCCG TCATCCCGAT ATTAAATGGT TGCGAAAAAA CCATGACATC GAAGAATTGG CTGAACTTCA ACAACAAATT CTCGATCATT GCTGGAAGTG GCTAAAACCC GGAGGCACGC TTCTTTATGC CACGTGTTCG ATTTTACCGC AGGAAAACCG CGACCAGATC AGTGCGTTTT TAGATAGAAC GGTAGATGCT AAGCTAGACA TACTCGCCCA GCAAAATTCG CCACAGGATA TAGGTTGGCA AATCACGCCA GGACAAGACA ATATGGATGG GTTTTATTAC GCCCGTTTAT TGAAAGCGAC CCACAAGTAG
|
Protein sequence | MNLRALAAKA IFEVLEKGVS LSVALPEQQK HLASGKDKAL LAELCYGVMR TLPQIEKRIS ECLEKPLKGK QRIIHQLLIV GCYQLYFTRI PSHAAISETA EACRQLKFEG MVKVVNGVLR NIQRQLSPLS TESDTLSYNT PAWLIKRLKE AYPEQWQDII QQSHERPPMW LRNNRLSQSR TEYLAALAEL DIEASEGSSA DAILLAHPKD VATLPRFHEG AASVQDGAAQ WAATLLAPQA NELILDACAA PGGKSCHLLE VEPNIKLVAV DFDAKRLERV QQNLDRLSLK AELIHGDAAN IGSWWQGGLF DRILLDAPCS ATGVIRRHPD IKWLRKNHDI EELAELQQQI LDHCWKWLKP GGTLLYATCS ILPQENRDQI SAFLDRTVDA KLDILAQQNS PQDIGWQITP GQDNMDGFYY ARLLKATHK
|
| |