| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0016 |
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| Symbol | |
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| ID | 5081491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 21777 |
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| End bp | 23234 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640497132 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_001181551 |
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| Protein GI | 146291127 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.917288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATATA AAACCATAAT AAGAATAATA GGTCTATTAA TCGGCTTATT TTCCATCACT
ATGCTGCCAC CAGCACTGAT CGCTATTTGG TATAACGATG GTGGCGGTAC GGCATTTATC
CAAGCCTTTT TTGTGAGTCT ATTTATTGGT TTTTGGCTTT GGTATCCCAA TCGCCGCTGC
AAAGAAGAGT TACGTACCCG AGAGGGTTTT TTGATTGTTG TATTATTTTG GACAGTACTG
GGTTCTATAG GATCCCTTCC ATTTATTTTC TCTAATCAGC CAGATCTGAG TTGGACAGAT
AGTTTTTTTG AATCTTTTTC GGCGCTGACC ACGACTGGGG CGACAGTGAT TGTTGGTCTT
GACTCCTTGC CCAAAGCTAT TCTGTTTTAT CGGCACATGC TGCAATGGCT CGGTGGTATG
GGGATCATTG TGCTTGCTGT GGCTATTTTA CCTGTACTTG GTGTTGGGGG GATGCAGCTT
TATCGTGCTG AAATCCCAGG GCCTGTGAAA GACAGTAAGA TGACACCTAG GATAGCTGAA
ACAGCTAAAG CACTGTGGTA CATCTATTTA CTGTTAACGA TCTCCTGCGC TGGCGCCTAT
TGGTTGGCAG GAATGAGTAT TTTTGATGCA ATTTGTCATT CTTTTTCAAC CATAGCCATT
GGTGGCTTTT CGACCCACGA TGCCAGTATG GGCTATTTCG ATAGTCCTGT TATCAATCTG
ATTTGTGTGT TCTTTCTAAT TGTCTCTGCG GTTAACTTTA GCGTGCATTT TGCGGCATTT
TCGCGGCGAG GTATTAACGT TAAAGTGTAT TTTAAAGATA CTGAATTTAA AATGCTGGTG
GCGATTCAAC TTATTCTTAC CGCGATTTGT TTTCTGACGC TTTATCATTC TGGTATTTAT
GAATCACCCG AAGAAACCTT AGATCAGGCG CTGTTTCAAG CAGTTTCTGT GGCGACAACG
GCTGGATTCG GTACGGATAG CTTTCATATG TGGCCGCTAT TTTTACCGAT GTTATTAATA
TTCTCGAGCT TTATTGGTGG TTGTGGCGGT TCAACTGCGG GGGGGATTAA AGTTATCCGG
GTGATTTTGC TGCTGTTACA GGGGTCGCGC GAATTGAAAC GACTCGTTCA CCCGAAGGCG
ATGTTTTCAA TTAGGATTGG TTCTAAGGCT TTACCAGACC GTGTTGTCGA TGCTGTATGG
GGATTCTTTT CTGCCTATGC GCTAGTGTTT GTGATTTGTA TGCTTGCACT GATGGCGATG
GGTTTAGATG ATATTACCGC TTTTAGTGCT ACCGCGGCTT GCTTAAACAA CCTTGGCCCA
GGTTTAGGCG AGGTGGCGAG TAATTATGCC AGTATCGGTG ATGGAGCAAA GTGGGTGCTG
GTGGTCGCGA TGTTGTTTGG ACGCCTCGAA GTCTTTACCT TACTGATTTT ATTCACGCCA
ACCTTTTGGA AAAATTAA
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| Protein sequence | MQYKTIIRII GLLIGLFSIT MLPPALIAIW YNDGGGTAFI QAFFVSLFIG FWLWYPNRRC
KEELRTREGF LIVVLFWTVL GSIGSLPFIF SNQPDLSWTD SFFESFSALT TTGATVIVGL
DSLPKAILFY RHMLQWLGGM GIIVLAVAIL PVLGVGGMQL YRAEIPGPVK DSKMTPRIAE
TAKALWYIYL LLTISCAGAY WLAGMSIFDA ICHSFSTIAI GGFSTHDASM GYFDSPVINL
ICVFFLIVSA VNFSVHFAAF SRRGINVKVY FKDTEFKMLV AIQLILTAIC FLTLYHSGIY
ESPEETLDQA LFQAVSVATT AGFGTDSFHM WPLFLPMLLI FSSFIGGCGG STAGGIKVIR
VILLLLQGSR ELKRLVHPKA MFSIRIGSKA LPDRVVDAVW GFFSAYALVF VICMLALMAM
GLDDITAFSA TAACLNNLGP GLGEVASNYA SIGDGAKWVL VVAMLFGRLE VFTLLILFTP
TFWKN
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