Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4896 |
Symbol | |
ID | 5603736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 5432463 |
End bp | 5433464 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640940472 |
Product | transcriptional repressor RbsR |
Protein accession | YP_001481116 |
Protein GI | 157373127 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000156613 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000782419 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGCCACCA TGAAAGACGT CGCCCGCCTG GCGGGCGTTT CAACCTCGAC GGTCTCGCAC GTCATTAATG ACAATCGCTT TGTCAGCGAC AGCGTGCGGG CCAAAGTCAT GGCGGCCGTT GAACAACTGA ACTATGCGCC TTCTGCGCTG GCGCGCAGCC TCAAACTAAA CCAGACGCGT ACCATCGGCA TGCTGGTTAC CTCCAGCAAT AACCCGTTTT ATGCCGAAGT CGTGCGCGGC GTTGAGCGCA GTTGCTATGA ACGTGGCTAC AGTCTGATCC TGTGCAATAC CGAAGAAGAT GCCGCACGCA TGAATCGCAA CATGGAGACG CTGTTGCAAA AACGCGTCGA TGGCTTGCTA TTAATGTGCA CCGAAAATCA TCGGCCATCG CAGGACGCGC TGAGTCGTTA TCCTTCGTTG CCGATCGTCA TGATGGATTG GGCGCCGTTC GAAGGGGCCA ACGATATCAT TCAGGACAAC TCGCTGCTGG GCGGTGAGAT GGCGACCGAT CACCTGATCG CCCGTGGGTA TCGCAAGATT GCCTGCATCG CCGGCCCACA GGATAAAACT ACCGCACGTC ATAGGCTGGA AGGCTACCGT CGCGCCATGC AACGCGCCGG ATTGGCAGTC TTGCCGGGGT ACGAAGTGCA CTGCGATTTT GAATTTGAAG GCGGCGTGGA TGCCATGAAG CAACTGCTGG CGCTGGCTGA ACCCCCGCAT GCGGTATTCG CCGGTAACGA TGCGGTAGCC GTAGGTGCCT ATCAGGCTCT GTATCAGGCC GGATTGTCGG TGCCGCAAGA CATGGCGGTG ATGGGCTACG ATGATATAGA GCTGGCCAAA TATCTGGCCC CACCGTTAAG CACTATTCAC CAACCGAAAG ATTCACTGGG GGAGTTGGCG ATTGATACGC TGATTAACCG CCTGCAGAAC CCGGACCGCG AAGCCCAGGT TCTGGTGTTG ACCCCTGAGC TGGTGGAGCG TGCTTCGGTC GGTTACCGTT AA
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Protein sequence | MATMKDVARL AGVSTSTVSH VINDNRFVSD SVRAKVMAAV EQLNYAPSAL ARSLKLNQTR TIGMLVTSSN NPFYAEVVRG VERSCYERGY SLILCNTEED AARMNRNMET LLQKRVDGLL LMCTENHRPS QDALSRYPSL PIVMMDWAPF EGANDIIQDN SLLGGEMATD HLIARGYRKI ACIAGPQDKT TARHRLEGYR RAMQRAGLAV LPGYEVHCDF EFEGGVDAMK QLLALAEPPH AVFAGNDAVA VGAYQALYQA GLSVPQDMAV MGYDDIELAK YLAPPLSTIH QPKDSLGELA IDTLINRLQN PDREAQVLVL TPELVERASV GYR
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