Gene Spro_4882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4882 
SymbolglnL 
ID5602600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5410275 
End bp5411324 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content59% 
IMG OID640940454 
Productnitrogen regulation protein NR(II) 
Protein accessionYP_001481102 
Protein GI157373113 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.191848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00011549 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACTG GCAAGCTGCC CGATGCTGGG CAGATCCTCA ATTCTCTCAT CAACAGCATC 
CTGCTGTTGG ATGACTCGCT GGCGGTTCAT TACGCCAATC CGGCGGCACA ACAACTGCTG
GCACAAAGTT CCCGTAAACT TTTCGGTACA CCGTTACCCG ATCTGCTCGG CTATTTTTCG
CTGAATGTCG ATCTGATGCG TGAGAGCCTG CGCGCTGGCC AGGGCTTTAC CGATAGCGAA
GTGACCCTGG TGGTTGACGG GCGCGCGCAT ATCCTCTCCC TGACCGCCCA GACGCTGTCT
GAAGGCTATA TCCTGATCGA ACTGGCGCCG ATGGATAACC AACGTCGCCT GAGCCAGGAA
CAGCTGCAGC ATGCCCAGCA GGTTGCCGCC CGCGATCTGG TTCGTGGCCT GGCGCATGAG
ATTAAAAATC CGCTTGGCGG GCTGCGCGGT GCGGCGCAGT TGCTGGCCAA GGCTCTGCCC
GATCCGTCGC TGACCGAATA CACCAAGGTG ATCATTGAAC AGGCCGACCG CCTGCGCAAT
CTGGTCGATC GCCTGCTGGG CCCGCAACGG CCAGGCCAGC ACATTACTCA AAGTATTCAT
CAGGTGGCGG AGCGAGTCTG CCAACTGGTG TCGCTGGAGA AGCCGGATAA CGTAACGCTG
GTACGCGACT ACGACCCGAG CCTGCCGGAG TTGGCGCACG ACCCGGATCA AATCGAACAG
GTGCTGCTGA ACATCACTCG CAATGCGCTG CAGGCGCTGG GTGAAGCCGG TGGCACCATT
ACGCTGCGCA CCCGAACCGC ATTCCAGATC ACCCTGCACG GCACCCGCTA CCGGTTAGCG
GCACGTATCG ATATTGAAGA TGACGGCCCC GGCGTACCGG CGCAGTTGCA GGACACGCTG
TTTTACCCAA TGGTCAGCGG CCGCGAAGGC GGAACCGGCC TGGGTTTATC CATCGCCCGT
AATCTTATCG ATCAGCATTG CGGAAAAATT GAATTTAACA GTTGGCCAGG ACATACCGAA
TTCTCGGTTT ACCTGCCTAT TCGCCAGTGA
 
Protein sequence
MATGKLPDAG QILNSLINSI LLLDDSLAVH YANPAAQQLL AQSSRKLFGT PLPDLLGYFS 
LNVDLMRESL RAGQGFTDSE VTLVVDGRAH ILSLTAQTLS EGYILIELAP MDNQRRLSQE
QLQHAQQVAA RDLVRGLAHE IKNPLGGLRG AAQLLAKALP DPSLTEYTKV IIEQADRLRN
LVDRLLGPQR PGQHITQSIH QVAERVCQLV SLEKPDNVTL VRDYDPSLPE LAHDPDQIEQ
VLLNITRNAL QALGEAGGTI TLRTRTAFQI TLHGTRYRLA ARIDIEDDGP GVPAQLQDTL
FYPMVSGREG GTGLGLSIAR NLIDQHCGKI EFNSWPGHTE FSVYLPIRQ