Gene Spro_4861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4861 
Symbol 
ID5604439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5383318 
End bp5384502 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content52% 
IMG OID640940434 
Productnucleoside transporter 
Protein accessionYP_001481082 
Protein GI157373093 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00699711 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGCAAA TTCTGCAATT TATTTTTGCC CTGGTGGTGA TCATCGCCCT GGCGCTGCTG 
GTCAGCAACG ACCGCAAAAA AATCCGCCTG CGTTATATTA TTCAACTTTT GGTCATTGAA
GGCGCACTCG CCTATTTCTT CCTGCATTCA GAAAGTGGCC TTAGCGTCAT CAGACACGTC
GCCGGCTTCT TTGAAACGCT GCTGACATAC GCTGCGCAAG GCTCCGACTT TGTGTTTGGC
GGCATGAGCA AAGACGGGTT GGCGTTCATC TTCCTTGGGG TTTTGTGCCC GATTATCTTT
ATTTCTGCGC TAATCGGTAT TTTGCAGCAT TTCCGCATTC TGCCGCTGGT TATCCGTGTG
GTCGGTACCC TGCTTTCCAA AGTTAACGGC ATGGGCAAGC TGGAGTCGTT CAACGCCGTC
AGCACGCTGG TGCTCGGACA ATCGGAAAAC TTCATCGCCT ACAAGGGCAT CATTGGTGAT
ATCTCTCCGC GCCGCATGTA CACCATGGCG GCAACCGCCA TGTCGACAGT CTCCATGTCC
ATCGTTGGCG CCTATATGTC GATGATCGAT GCGCAATACG TAGTCGCTGC GTTGATCCTG
AATATGTTCA GTACCTTTAT CATTTTGTCG ATCATCAACC CCTATCAGTT GGACGATGAA
CCTGAGCTGA AGCTGAGCAA GCTGCATGAA GATCAGAGCT TCTTTGAAAT GCTGGGCGAG
TACATTTTGG CGGGCTTCAA AATTGCGATG ATTATCGCTG CCATGCTGAT CGGCTTTATT
GCACTGATTT CTGCGGTAAA CGCCCTGTTC TCCGCCGTGT TCGGTATCAG CTTCCAGCAG
ATCCTGGGCT ACGTATTCTA TCCGTTGGCC TGGTTAATCG GCATCCCGGC ACCGGATGCG
CTGCGAGCCG GCAGCATCAT GGCGACCAAG CTGGTAGCCA ATGAATTTGT GGCAATGATT
GAATTGAAGA AAATTGCGGC GGAGCTAACA CCACGCGGCC TGGGCATCCT GTCGGTATTC
CTGGTGTCCT TCGCCAACTT TGCCTCTATC GGCATCGTGG CCGGGGCAAT CAAAGGGCTT
AACGAACGAC AGGGCAACGT GGTTTCTCGT TTTGGCCTGA AGCTGGTCTA CGGCTCAACG
CTGGTTAGCC TGCTGTCGGC GGCAATCGCC GGGCTGGTGC TATAA
 
Protein sequence
MPQILQFIFA LVVIIALALL VSNDRKKIRL RYIIQLLVIE GALAYFFLHS ESGLSVIRHV 
AGFFETLLTY AAQGSDFVFG GMSKDGLAFI FLGVLCPIIF ISALIGILQH FRILPLVIRV
VGTLLSKVNG MGKLESFNAV STLVLGQSEN FIAYKGIIGD ISPRRMYTMA ATAMSTVSMS
IVGAYMSMID AQYVVAALIL NMFSTFIILS IINPYQLDDE PELKLSKLHE DQSFFEMLGE
YILAGFKIAM IIAAMLIGFI ALISAVNALF SAVFGISFQQ ILGYVFYPLA WLIGIPAPDA
LRAGSIMATK LVANEFVAMI ELKKIAAELT PRGLGILSVF LVSFANFASI GIVAGAIKGL
NERQGNVVSR FGLKLVYGST LVSLLSAAIA GLVL