Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4861 |
Symbol | |
ID | 5604439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 5383318 |
End bp | 5384502 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640940434 |
Product | nucleoside transporter |
Protein accession | YP_001481082 |
Protein GI | 157373093 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00699711 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGCAAA TTCTGCAATT TATTTTTGCC CTGGTGGTGA TCATCGCCCT GGCGCTGCTG GTCAGCAACG ACCGCAAAAA AATCCGCCTG CGTTATATTA TTCAACTTTT GGTCATTGAA GGCGCACTCG CCTATTTCTT CCTGCATTCA GAAAGTGGCC TTAGCGTCAT CAGACACGTC GCCGGCTTCT TTGAAACGCT GCTGACATAC GCTGCGCAAG GCTCCGACTT TGTGTTTGGC GGCATGAGCA AAGACGGGTT GGCGTTCATC TTCCTTGGGG TTTTGTGCCC GATTATCTTT ATTTCTGCGC TAATCGGTAT TTTGCAGCAT TTCCGCATTC TGCCGCTGGT TATCCGTGTG GTCGGTACCC TGCTTTCCAA AGTTAACGGC ATGGGCAAGC TGGAGTCGTT CAACGCCGTC AGCACGCTGG TGCTCGGACA ATCGGAAAAC TTCATCGCCT ACAAGGGCAT CATTGGTGAT ATCTCTCCGC GCCGCATGTA CACCATGGCG GCAACCGCCA TGTCGACAGT CTCCATGTCC ATCGTTGGCG CCTATATGTC GATGATCGAT GCGCAATACG TAGTCGCTGC GTTGATCCTG AATATGTTCA GTACCTTTAT CATTTTGTCG ATCATCAACC CCTATCAGTT GGACGATGAA CCTGAGCTGA AGCTGAGCAA GCTGCATGAA GATCAGAGCT TCTTTGAAAT GCTGGGCGAG TACATTTTGG CGGGCTTCAA AATTGCGATG ATTATCGCTG CCATGCTGAT CGGCTTTATT GCACTGATTT CTGCGGTAAA CGCCCTGTTC TCCGCCGTGT TCGGTATCAG CTTCCAGCAG ATCCTGGGCT ACGTATTCTA TCCGTTGGCC TGGTTAATCG GCATCCCGGC ACCGGATGCG CTGCGAGCCG GCAGCATCAT GGCGACCAAG CTGGTAGCCA ATGAATTTGT GGCAATGATT GAATTGAAGA AAATTGCGGC GGAGCTAACA CCACGCGGCC TGGGCATCCT GTCGGTATTC CTGGTGTCCT TCGCCAACTT TGCCTCTATC GGCATCGTGG CCGGGGCAAT CAAAGGGCTT AACGAACGAC AGGGCAACGT GGTTTCTCGT TTTGGCCTGA AGCTGGTCTA CGGCTCAACG CTGGTTAGCC TGCTGTCGGC GGCAATCGCC GGGCTGGTGC TATAA
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Protein sequence | MPQILQFIFA LVVIIALALL VSNDRKKIRL RYIIQLLVIE GALAYFFLHS ESGLSVIRHV AGFFETLLTY AAQGSDFVFG GMSKDGLAFI FLGVLCPIIF ISALIGILQH FRILPLVIRV VGTLLSKVNG MGKLESFNAV STLVLGQSEN FIAYKGIIGD ISPRRMYTMA ATAMSTVSMS IVGAYMSMID AQYVVAALIL NMFSTFIILS IINPYQLDDE PELKLSKLHE DQSFFEMLGE YILAGFKIAM IIAAMLIGFI ALISAVNALF SAVFGISFQQ ILGYVFYPLA WLIGIPAPDA LRAGSIMATK LVANEFVAMI ELKKIAAELT PRGLGILSVF LVSFANFASI GIVAGAIKGL NERQGNVVSR FGLKLVYGST LVSLLSAAIA GLVL
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