Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4825 |
Symbol | rfaD |
ID | 5606103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 5345087 |
End bp | 5346016 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640940398 |
Product | ADP-L-glycero-D-mannoheptose-6-epimerase |
Protein accession | YP_001481046 |
Protein GI | 157373057 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.375362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000198201 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTATCG TCACTGGTGG CGCCGGCATG ATCGGCAGCA ATATCATTAA GGCGCTGAAT GACACAGGGT ATCGCGATAT CCTGGTGGTA GATAACCTGA AAGACGGCAC CAAATTCGCC AACCTGGTTG ATCTCGATAT CGCCGACTAT ATCGATAAAG AAGATTTCAT CGCCAACATC ATTGCCGGTG ACGATCTGGG CGAAATCGAC GCCATCTTCC ATGAGGGCGC CTGCTCTTCC ACCACCGAGT GGGACGGCAA GTACATGATG GACAATAACT ATCAGTACTC CAAAGACCTG CTGCACTACT GCCTGGATCG TGAGATCCCG TTCCTGTATG CCTCGTCTGC TGCCACCTAC GGCGGCCGCG AAGAATTTAT CGAAGAGCGC CAATTTGAAG CACCGCTGAA CGTCTACGGC TACTCAAAAT TCCTGTTCGA CCAATATGTC CGTGAAATTC TGCCTGAGGC AGAATCACAG ATCTGCGGCT TCCGTTACTT CAACGTCTAC GGCCCGCGCG AAGGCCACAA AGGCAGCATG GCCAGCGTGG CGTTCCACCT GAACGGCCAG ATCAACCGTG GCGAGAACCC AAAACTGTTC GACGGCAGTC AAGACTTCAA GCGTGACTTC ATCTACGTCG GCGACGTGGC GGCAGTGAAC CTGTGGTTCT TGAAAAGCGG CGTATCCGGC ATCTTCAACT GCGGCACCGG CCGTGCGGAA ACCTTCCAGG CGGTCGCCGA TGCCGTGGTC GACTTCCACC AGAAAGGTGC GGTAGAAAAC ATTCCGTTCC CGGAAAAACT GAAGGGTCGC TACCAGGCAT TCACTCAGGC CGACCTGACC AAACTGCGCG CTGCCGGCTA TGACGCGCCG TTCAAAACGG TCGCCGAAGG CGTGAAAGAG TACATGGCCT GGTTAAACCG CACCGCTTAA
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Protein sequence | MIIVTGGAGM IGSNIIKALN DTGYRDILVV DNLKDGTKFA NLVDLDIADY IDKEDFIANI IAGDDLGEID AIFHEGACSS TTEWDGKYMM DNNYQYSKDL LHYCLDREIP FLYASSAATY GGREEFIEER QFEAPLNVYG YSKFLFDQYV REILPEAESQ ICGFRYFNVY GPREGHKGSM ASVAFHLNGQ INRGENPKLF DGSQDFKRDF IYVGDVAAVN LWFLKSGVSG IFNCGTGRAE TFQAVADAVV DFHQKGAVEN IPFPEKLKGR YQAFTQADLT KLRAAGYDAP FKTVAEGVKE YMAWLNRTA
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