Gene Spro_4682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4682 
Symbol 
ID5606503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5172528 
End bp5173289 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content52% 
IMG OID640940248 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001480903 
Protein GI157372914 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCAG AAAAAACGAT ATTGATCACT GGCGCTTCCT CCGGTTTGGG AAAAGCGATG 
GCCGAACACT TTTTGGCTAA AGGCGCCAAT ATTGTTATTA ATGGCCTGAC CGCGTCGAAG
TTAGACAAAT TTCTTGCAGA ACACCTTGCC GATAAAGATC GCATTGCGTT GGTTGCCGGG
GATATTGGCC TGAAAGCCAC CAGTGATCGT ATGGCCCAGG CCGCGCTGGA TAAATTCGGC
TCCGTGGATG TGCTGATAAA CAATGCGGGT ATTTTTGTCC CTAAGCCTTT TCTCGCCGAG
ACCGAAGAAA ATCTGGATCG CTATTACGCC AGTGGCGTCA AGGGGCCGTT CTTTGCGTCA
CAGGCGGTGA TCCCCACCAT GATCAAGCAG GGCGGTGGTT CCATTATCAA TATCGGTTCA
ATGTGGGTAG AGCACCCGCT GGAAGCGACA CCGAGTTCCG CTTCGCAGGT GGCCAAAGGC
GGCATGCATA CCCTGACCCG TCATCTGGCC ATCGAGTTTG CCAAAGACAA TATCCGGGTT
AACACTGTCG CACCGGGCGT CATTGAAACC CCGTTGTACG ACGACCTGAT GGATAAAGAG
GCGTTCCGCG CGCTGGCTAA CCTGCATCCA CTACGCAAAC TGGGCAAAAT ATCAGACATT
ATTGCCTGGG TAGATATGTT GGCCGGTGAA GGCAGCCGCT TCGTGACCGG GCAAACCCTG
TTTATCGACG GTGGCATCAC CGCAGGTAAC CATGTTAATT GA
 
Protein sequence
MFAEKTILIT GASSGLGKAM AEHFLAKGAN IVINGLTASK LDKFLAEHLA DKDRIALVAG 
DIGLKATSDR MAQAALDKFG SVDVLINNAG IFVPKPFLAE TEENLDRYYA SGVKGPFFAS
QAVIPTMIKQ GGGSIINIGS MWVEHPLEAT PSSASQVAKG GMHTLTRHLA IEFAKDNIRV
NTVAPGVIET PLYDDLMDKE AFRALANLHP LRKLGKISDI IAWVDMLAGE GSRFVTGQTL
FIDGGITAGN HVN