Gene Spro_4580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4580 
Symbol 
ID5605279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5052921 
End bp5053553 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content50% 
IMG OID640940146 
ProductcAMP-regulatory protein 
Protein accessionYP_001480801 
Protein GI157372812 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0550419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCTCG GCAAACCGCA AACAGACCCT ACTCTCGAAT GGTTCCTGTC TCATTGCCAT 
ATCCACAAAT ATCCATCCAA AAGTACGCTG ATTCACCAAG GTGAAAAGGC CGAAACGCTT
TACTACATCG TCAAAGGCTC CGTCGCGGTG CTGATTAAGG ATGAAGAAGG TAAAGAGATG
ATCCTGTCCT ACCTTAACCA GGGGGATTTC ATCGGCGAGC TTGGATTATT TGAAGAAGGT
CAGGAGCGTA GCGCCTGGGT TAGGGCGAAA ACCGCCTGTG AAGTGGCTGA AATTTCCTAT
AAGAAATTCC GCCAGTTGAT TCAGGTTAAC CCGGACATCC TGATGCGCCT GTCAGCTCAG
ATGGCAAACC GTCTGCAGAT CACATCTGAG AAAGTGGGTA ACCTTGCTTT CCTGGACGTT
ACGGGCCGCA TCGCGCAAAC CCTACTGAAC CTGGCGAAAC AGCCTGATGC CATGACCCAC
CCGGATGGTA TGCAGATTAA AATTACCCGC CAGGAAATTG GCCAGATCGT CGGTTGCTCA
CGTGAAACCG TGGGTCGTAT TCTGAAAATG CTGGAAGATC AAAACCTGAT CTCCGCCCAC
GGCAAAACTA TTGTCGTTTA CGGCACGCGT TAA
 
Protein sequence
MVLGKPQTDP TLEWFLSHCH IHKYPSKSTL IHQGEKAETL YYIVKGSVAV LIKDEEGKEM 
ILSYLNQGDF IGELGLFEEG QERSAWVRAK TACEVAEISY KKFRQLIQVN PDILMRLSAQ
MANRLQITSE KVGNLAFLDV TGRIAQTLLN LAKQPDAMTH PDGMQIKITR QEIGQIVGCS
RETVGRILKM LEDQNLISAH GKTIVVYGTR