Gene Spro_4578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4578 
Symbol 
ID5605710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5051225 
End bp5052094 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content58% 
IMG OID640940144 
Productphosphoribulokinase 
Protein accessionYP_001480799 
Protein GI157372810 
COG category[C] Energy production and conversion 
COG ID[COG3954] Phosphoribulokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0260853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA AACATCCCGT TATCGCAGTG ACCGGCTCCA GCGGCGCCGG CACCACCACC 
ACCAGTGTGG CGTTCCGTAA AATCTTTCAG CAGTTGAACA TCCGCGCCGC GGAGCTGGAA
GGCGACAGTT TCCATCGCTA TACCCGGCCG GAAATGGACG CGGCGATCCG CAAAGCGCGC
GATCTTGGCC GTCATATCAG CTATTTCGGC CCCGAGGCCA ACGACTTTGG CCTGCTGCAA
CAAAGCTTTA GCGAATACGG CACCAACGGC ACCGGCCGTT CACGCAAGTA CCTGCACACC
TACGATGAAG CGGTGCCCTA TAACCAGGTA CCCGGCACCT TTACCCCGTG GGAAGCCTTA
CCGGCACCGA CCGACGTGCT GTTTTATGAA GGGCTGCACG GCGGCGTAGT GACCGAGCAC
AACGACGTGG CCAAGCATGT CGATTTGCTG GTCGGCGTGG TGCCTATCGT TAACCTGGAA
TGGATCCAAA AGTTAATCCG CGATACCGGC GAGCGCGGCC ACTCTCGTGA AGCGGTGATG
GATTCGGTGG TACGTTCGAT GGAAGACTAC ATCAACTACA TCACGCCGCA GTTTTCCCGC
ACCCATATCA ACTTCCAGCG GGTGCCGACG GTAGATACCT CCAACCCGTT CGCCGCCAAG
GCGATCCCCT CGCTGGACGA GAGCTTTGTG GTGATCCACT TCCGCGGCCT GGATCAGATC
GATTTCCCTT ATCTGCTGGC GATGCTGCAG GGTTCTTTTA TCTCGCATAT CAATACGCTG
GTGGTGCCGG GCGGCAAAAT GGGGCTGGCG ATGGAGTTGA TTATGGCGCC GCTGGTGCAG
CAACTGCTGG AAGGCAAAAA AATCGAATAG
 
Protein sequence
MSAKHPVIAV TGSSGAGTTT TSVAFRKIFQ QLNIRAAELE GDSFHRYTRP EMDAAIRKAR 
DLGRHISYFG PEANDFGLLQ QSFSEYGTNG TGRSRKYLHT YDEAVPYNQV PGTFTPWEAL
PAPTDVLFYE GLHGGVVTEH NDVAKHVDLL VGVVPIVNLE WIQKLIRDTG ERGHSREAVM
DSVVRSMEDY INYITPQFSR THINFQRVPT VDTSNPFAAK AIPSLDESFV VIHFRGLDQI
DFPYLLAMLQ GSFISHINTL VVPGGKMGLA MELIMAPLVQ QLLEGKKIE