Gene Spro_4527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4527 
SymbolrpsE 
ID5607263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5014720 
End bp5015223 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content50% 
IMG OID640940093 
Product30S ribosomal protein S5 
Protein accessionYP_001480748 
Protein GI157372759 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000233492 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000167424 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTCACA TCGAAAAACA AGCTGGCGAA CTGCAGGAAA AGCTGATCGC GGTAAACCGC 
GTATCTAAAA CCGTAAAAGG TGGCCGTATT TTCAGCTTTA CCGCACTGAC AGTAGTTGGT
GATGGTAACG GTCGCGTTGG TTTTGGCTAC GGCAAAGCAC GCGAAGTTCC GGCAGCGATC
CAGAAAGCGA TGGAAAAAGC CCGTCGCGCT ATGATTAATG TTGCTTTGAA TAGCGGTACT
CTGCAGCACC CTGTTAAAGG TGCTCACACG GGTTCTCGCG TGTTCATGCA ACCAGCTTCC
GAAGGTACCG GTATCATCGC CGGTGGTGCA ATGCGCGCCG TCCTGGAAGT TGCAGGGGTT
CATAACGTAT TAGCTAAAGC ATATGGTTCT ACTAACCCGA TCAACGTGGT TCGTGCAACT
ATTGCTGCTT TGGAAGATAT GAAATCCCCA GAAATGGTCG CTGCCAAGCG TGGTAAGTCC
GTCGAAGAAA TTCTAGGGAA ATAA
 
Protein sequence
MAHIEKQAGE LQEKLIAVNR VSKTVKGGRI FSFTALTVVG DGNGRVGFGY GKAREVPAAI 
QKAMEKARRA MINVALNSGT LQHPVKGAHT GSRVFMQPAS EGTGIIAGGA MRAVLEVAGV
HNVLAKAYGS TNPINVVRAT IAALEDMKSP EMVAAKRGKS VEEILGK