Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4506 |
Symbol | aroE |
ID | 5605842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 5000107 |
End bp | 5000925 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640940073 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001480728 |
Protein GI | 157372739 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000408747 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000607991 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGAAGT TTGCAGTATT CGGTAATCCT ATCGGCCACA GCAAGTCACC GCGTATTCAT GCGCTATTTG CCGCGCAAAC AGGGATAGAA CATCCTTATG GCACTGTGCT GGCGCCACTG GATGGTTTCG AAACCACTTT GCAGACGTTT ATTCAGGCGG GTGGCAAGGG AGCGAACGTC ACGGTGCCTT TTAAAGAAAA TGCTTATGAA GCGGCGACCG AACTGAGTCA ACGAGCCTCG CTGGCCGGTG CGGTAAATAC CTTGAAGATA CTGCCAGACG GTGGGTTACT GGGTGACAAC ACTGATGGGA TCGGCCTGCT GACCGATCTT GAACGTCAGG GGTTGATCCA ACCCAAGGAT CGTATCTTGT TGGTGGGGGC TGGTGGCGCG GCACGTGGCG CGATCTTGCC GCTACTGTCT TTTGGTTGTG AAGTGGTGAT CACCAACCGT ACTTTTAGCC GTGCGCAGAC ATTGGCGCAG GTATTCCAGC ATCTGGGCGA AATATCCGCG TTACCCCTGG ATCAACTTGA TCAACAGCGG TTTGATTTAG TGATTAACGC TACGGCATCC GGTATCAGCG GTGACATCCC GGCGCTACCG GTTGGTACGG TCAATGGCCA TACGCGTTGT TATGACATGT TTTATCAGCA GGGATTAACT CCCTTTCTGG CCTGGGCGCA GCAACAGGGT GCCACAGAAT ATGCCGACGG TTTAGGGATG CTGGTGGGGC AGGCCGCGCA TGCGTTCCTG CTGTGGCATG GTGTGATGCC GGAGATCGAA CCGGTATTGC GCCAGCTGCG TCACGAACTG GCAGTGTAA
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Protein sequence | MEKFAVFGNP IGHSKSPRIH ALFAAQTGIE HPYGTVLAPL DGFETTLQTF IQAGGKGANV TVPFKENAYE AATELSQRAS LAGAVNTLKI LPDGGLLGDN TDGIGLLTDL ERQGLIQPKD RILLVGAGGA ARGAILPLLS FGCEVVITNR TFSRAQTLAQ VFQHLGEISA LPLDQLDQQR FDLVINATAS GISGDIPALP VGTVNGHTRC YDMFYQQGLT PFLAWAQQQG ATEYADGLGM LVGQAAHAFL LWHGVMPEIE PVLRQLRHEL AV
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