Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4459 |
Symbol | |
ID | 5606672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4930301 |
End bp | 4931665 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640940021 |
Product | DNA-damage-inducible SOS response protein |
Protein accession | YP_001480681 |
Protein GI | 157372692 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGC TTTCTGCCTT CACCAGCGAT ACCGATAAAG CCCTGTGGCG CCTTGCGCTG CCCATGATTT TCTCCAATAT CACCGTGCCG CTGCTTGGGC TGGTAGATAC CGCCGTCATC GGCCATCTCG ACAGCCCGAC CTATCTGGGT GGCGTAGCGG TTGGCTCCAT GGCCACCAGC TTCCTGTTTA TGCTGTTGCT GTTTCTGCGT ATGAGCACCA CCGGGCTGAC TGCTCAGGCG TTGGGGGCAC AAAATCCGCA GGGGCTGGCA CGAGCCTTTA TGCAGCCGTT GCTGCTGGCG GTGTTGGCCG GGGTGGCTAT TGTGTTGCTG CGCTATCCGC TGATTGAGTT GGCACTAAAA ATCGTCGGTG GCGATGGGGC GGTGCTGGAA CAGGCTCGTT TATTCCTCGA GATCCGCTGG CTGAGCGCCC CGGCGGCGCT GGCCAATATG GTGATCCTGG GTTGGTTGCT TGGCGTGCAA TACGTGCGCG CACCAGTGAT CCTGCTGATT GTTGGTAACC TGCTGAATAT CGTATTGGAT ATCTGGCTGG TGATGGGACT GGGCTGGAAC GTGCAGGGGG CCGCGACCGC GACCGCCATC TCTGAATATG CCACGCTGCT GTTGGGATTA TGGCTGTCCT GGCGCGTAAT GCGCATACGC GGCATTTCTG TGCCAATGCT GCGCCAAGCC TGGCGCGGTA ATCTGCGGCG TCTGCTGGCG TTGAATCGCG ACATTATGCT GCGTTCATTG CTGCTGCAAC TGTGTTTTGC CTCGCTGACC ATCTTCGGTG CCCGGCTGGG CGGCGAGGTG GTCGCGGTAA ATGCGGTGCT GATGAATTTG CTGACCTTCA CCGCTTATGC GCTGGACGGT TTTGCCTACG CGGTAGAGGC ACATTCGGGC CATGCCTATG GCGCCCGTGA CGATAGCCAA CTGCGTAAAG TATGGCGTGC GGCTTGCCGG CAGGCCTGTC TGGTGGCGTT GGGCTTTGGT CTGCTCTATG CCGTTGCCGG GCAGCAAATC ATTGCCGCCT TGACCTCTTT ACCGGAGCTG CGTGCACTGG CGAGCCACTA TCTGCCGTGG CAGGTAGTGC TGCCGTTGGT GGGAGTATGG TGCTATTTGC TGGACGGCAT GTTTATTGGT GCCACCCGCG GCGCAGAAAT GCGTAACAGC ATGGCAGTAG CCGCCGCCGG TTATGGGCTG ACGCTGTTTA CCCTACCTGT ACTGGGCAAC CATGGATTGT GGCTGGCGCT GGCGGTGTTC CTTTCGCTAC GCGGCCTTGC GCTCGGGTGG ATTTGGCATT GCCACAGGGT GCGAGGGACC TGGTTTACAG CGGATGTGAC ACAGTCAAAA ATGAGTAATA ATTAG
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Protein sequence | MRLLSAFTSD TDKALWRLAL PMIFSNITVP LLGLVDTAVI GHLDSPTYLG GVAVGSMATS FLFMLLLFLR MSTTGLTAQA LGAQNPQGLA RAFMQPLLLA VLAGVAIVLL RYPLIELALK IVGGDGAVLE QARLFLEIRW LSAPAALANM VILGWLLGVQ YVRAPVILLI VGNLLNIVLD IWLVMGLGWN VQGAATATAI SEYATLLLGL WLSWRVMRIR GISVPMLRQA WRGNLRRLLA LNRDIMLRSL LLQLCFASLT IFGARLGGEV VAVNAVLMNL LTFTAYALDG FAYAVEAHSG HAYGARDDSQ LRKVWRAACR QACLVALGFG LLYAVAGQQI IAALTSLPEL RALASHYLPW QVVLPLVGVW CYLLDGMFIG ATRGAEMRNS MAVAAAGYGL TLFTLPVLGN HGLWLALAVF LSLRGLALGW IWHCHRVRGT WFTADVTQSK MSNN
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