Gene Spro_4455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4455 
Symbol 
ID5606189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4927817 
End bp4928266 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content60% 
IMG OID640940017 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001480677 
Protein GI157372688 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTTCCC ACCGGCGGGA TGTTGCCGAC GATTTGGTTC AAGCCACCTG CGTGCGGGCG 
CTGGAACGCG CCGCACAGTT TGCCGTGGGC ACGCGGATGG ACCGCTGGTT GTTTGCGATC
CTTCATTCTA TCTGGCTTAA CGAGACTCGC GCCCAGCATA TCCGCCAGGG GCAGGGTTTT
GTCGACGTCG AAGAACTGGC AGGGTCGGAA AACAGTGAAG AGCCGATTTG GGCCAATGAG
GTGATGCAGC GGGTTAACCG GCTGCCGGAG GCGCAGCGCA ATACGCTGTT TCTGGTCTAT
GTGGAGGAGC TGTCTTACCG TGAGGCAGCC GAGGTGCTTG GCGTGCCCAT CGGCACCATC
ATGAGCCGTC TGGCGGCGGC ACGCCTGAGA TTGGCAAATG ACTGCATGCT GCAGACCCGT
TCACCCCAGG CAAAAGGAGA ACAATCATGA
 
Protein sequence
MLSHRRDVAD DLVQATCVRA LERAAQFAVG TRMDRWLFAI LHSIWLNETR AQHIRQGQGF 
VDVEELAGSE NSEEPIWANE VMQRVNRLPE AQRNTLFLVY VEELSYREAA EVLGVPIGTI
MSRLAAARLR LANDCMLQTR SPQAKGEQS