Gene Spro_4440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4440 
SymboluvrA 
ID5604079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4912520 
End bp4915351 
Gene Length2832 bp 
Protein Length943 aa 
Translation table11 
GC content60% 
IMG OID640940002 
Productexcinuclease ABC subunit A 
Protein accessionYP_001480662 
Protein GI157372673 
COG category[L] Replication, recombination and repair 
COG ID[COG0178] Excinuclease ATPase subunit 
TIGRFAM ID[TIGR00630] excinuclease ABC, A subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.732631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.38307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATA TCGAAGTTCG TGGTGCTCGG ACCCATAATC TCAAAAACAT CAACCTGATT 
ATCCCGCGTG ACAAGCTGAT CGTCGTCACC GGTTTATCCG GTTCAGGCAA GTCCTCGCTG
GCTTTTGATA CTCTGTATGC CGAAGGGCAG CGTCGCTACG TCGAGTCGCT CTCCGCCTAT
GCACGCCAGT TCCTCTCGCT GATGGAAAAA CCGGACGTCG ACCACATTGA AGGCCTGTCT
CCGGCGATCT CCATCGAGCA GAAATCGACC TCACATAACC CGCGATCTAC GGTCGGCACC
ATTACCGAGA TCCACGATTA CCTGCGCCTG TTGTTTGCCC GCGTCGGCGA ACCGCGCTGC
CCGGAGCACC ATGTGCCGCT GGCGGCGCAA ACCGTCAGCC AAATGGTGGA CAACGTGCTC
AACCAGCCGG AAGGCAAACG CCTGATGCTG CTGGCACCGG TGGTAAAAGA CCGCAAGGGC
GAGCATACCA AAACGCTGGA AAATCTGGCC ACCCAGGGCT ATATCCGAGC GCGTATCGAC
GGTGAAGTCT GCGATCTTTC CGATCCGCCA AAATTGGAGC TGCAGAAGAA GCACACTATC
GAAGTGGTGG TCGATCGCTT CAAGGTGCGT GACGATATGT CGCAGCGTCT GGCGGAATCG
TTCGAGACCG CGCTGGAGCT GTCCGGCGGC ACGGCCGTCG TTGCCGACAT GGACGACGAG
AAGGCCGATG AGTTGCTGTT CTCCGCCAAC TTCGCCTGCC CCATCTGCGG CTACAGCATG
CGCGAGCTGG AACCGCGGCT GTTCTCGTTC AACAACCCGG CCGGTGCCTG CCCGACCTGT
GACGGCCTGG GCGTGCAGCA GTTCTTCGAT CCGGAACGTG TGGTACAGAA CCCTGAGCTT
TCGCTGGCCG GCGGTGCGAT CCGCGGCTGG GATCGCCGTA ACTTCTATTA CTTCCAGATG
CTGCGCTCGT TGTCGGAGCA TTACGCGTTT GACGTCGAAG CGCCGTTCAA CAGCCTGGAT
GCCAACGTGC AGAAAGCGGT GCTCAGCGGT TCCGGCAAAG AAACCATCGA ATTCAAATAT
ATCAACGATC GCGGTGATAC CACCGTGCGC CGCCATCCGT TCGAAGGCGT GCTGCACAAT
ATGGAACGCC GCTATAAAGA AACCGAATCG AGCGCGGTAC GCGAAGAGCT GGCCAAGTTT
ATCAGCAACC GTCCTTGCGC CTCGTGCCAC GGCACCCGCC TGCGTGAAGA AGCGCGCAAC
GTGTTCGTTG AAGACACCAC GCTGCCGGAA ATCTCCGATC TGAGCATCGG CCACGCCATG
AGCTTCTTCC AGAACATGAA GCTCAGCGGC CAACGCGCCC AGATTGCCGA GAAAGTGCTG
AAAGAAATTG GCGATCGCCT TAAGTTCCTG GTGAACGTCG GCCTGAACTA CCTGTCGCTG
TCACGCTCGG CGGAAACCCT GTCCGGCGGT GAGGCACAGC GTATCCGTCT GGCCAGCCAG
ATTGGTGCCG GTTTGGTGGG CGTAATGTAC GTACTGGACG AGCCGTCAAT CGGCCTGCAT
CAGCGCGACA ACGAACGCCT GCTGGAAACG CTGATCCACC TGCGCAACCT CGGTAACACG
GTGATCGTGG TTGAGCATGA CGAAGACGCC ATCCGCGCCG CCGATCACGT GATCGACATC
GGCCCCGGTG CCGGGGTGCA TGGCGGTCAG GTGGTGGCAG AAGGTACCGT CGAAGACATC
ATGGCGCAGC CGGAATCACT GACCGGCCAG TTCCTCAGCG GCAAACGTGG GATTGCCATT
CCTGAGCAAC GTGTACCGGC CGATCCGACC AAGGTGCTGA AACTGAGCGG CGCACGCGGC
AACAACCTGA AAGACGTGAC GCTGACGCTG CCGGTGGGGC TGTTTACCTG TATTACCGGG
GTTTCCGGCT CGGGCAAGTC AACGCTGATC AACGACACGC TGTTCCCAAT CGCCCAGCGC
CAGCTCAACG GCGCCACCCT GGCCGAACCT GCACCTTTCC GCGAAGTGAC CGGTCTGGAG
CATTTCGACA AGGTGATCGA CATCGATCAA AGCCCGATCG GTCGGACTCC ACGTTCCAAC
CCGGCGACTT ACACCGGCAT CTTCACCCCG GTGCGTGAAC TGTTCGCCGG CGTACCTGAG
TCGCGTAGCC GCGGCTACAA CCCAGGCCGC TTCAGTTTTA ACGTCAAAGG CGGCCGCTGC
GAGGCCTGTC AGGGCGACGG CGTGATCAAG GTGGAAATGC ACTTCCTGCC GGATATCTAC
GTGCCGTGCG ACCACTGTAA AGGCAAGCGC TATAACCGCG AAACGCTGGA AGTGAAGTAC
AAAGGCAAAA GCATTCACGA AGTGCTGGAG ATGACCATCG AAGAGGCGCG TGAATTCTTC
GACGCGGTGC CGGCATTGGC GCGCAAACTG CAAACCTTGA TGGAAGTGGG CCTGTCGTAC
ATCCGTCTCG GCCAGTCGGC CACCACGCTG TCCGGCGGCG AGGCGCAACG CGTCAAGCTG
GCACGTGAGC TGTCGAAACG CGGTACCGGC CAAACGCTGT ATATCCTGGA TGAGCCGACC
ACCGGTCTGC ACTTCGCCGA TATCCAGCAA CTGCTGGCGG TGCTGCATCA GCTGCGCGAC
CAGGGCAATA CCATCGTGGT GATTGAGCAC AATCTGGACG TGATTAAAAC CGCGGACTGG
ATCGTCGACC TGGGGCCGGA AGGCGGCAGC GGCGGCGGTG AAATCCTGGT GGCCGGCACG
CCAGAAACCG TGGCCAACTG CGAAGCTTCA CATACCGCGC GCTTCCTCAA GCCGTTACTG
AAGAAGAAGT AA
 
Protein sequence
MDNIEVRGAR THNLKNINLI IPRDKLIVVT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY 
ARQFLSLMEK PDVDHIEGLS PAISIEQKST SHNPRSTVGT ITEIHDYLRL LFARVGEPRC
PEHHVPLAAQ TVSQMVDNVL NQPEGKRLML LAPVVKDRKG EHTKTLENLA TQGYIRARID
GEVCDLSDPP KLELQKKHTI EVVVDRFKVR DDMSQRLAES FETALELSGG TAVVADMDDE
KADELLFSAN FACPICGYSM RELEPRLFSF NNPAGACPTC DGLGVQQFFD PERVVQNPEL
SLAGGAIRGW DRRNFYYFQM LRSLSEHYAF DVEAPFNSLD ANVQKAVLSG SGKETIEFKY
INDRGDTTVR RHPFEGVLHN MERRYKETES SAVREELAKF ISNRPCASCH GTRLREEARN
VFVEDTTLPE ISDLSIGHAM SFFQNMKLSG QRAQIAEKVL KEIGDRLKFL VNVGLNYLSL
SRSAETLSGG EAQRIRLASQ IGAGLVGVMY VLDEPSIGLH QRDNERLLET LIHLRNLGNT
VIVVEHDEDA IRAADHVIDI GPGAGVHGGQ VVAEGTVEDI MAQPESLTGQ FLSGKRGIAI
PEQRVPADPT KVLKLSGARG NNLKDVTLTL PVGLFTCITG VSGSGKSTLI NDTLFPIAQR
QLNGATLAEP APFREVTGLE HFDKVIDIDQ SPIGRTPRSN PATYTGIFTP VRELFAGVPE
SRSRGYNPGR FSFNVKGGRC EACQGDGVIK VEMHFLPDIY VPCDHCKGKR YNRETLEVKY
KGKSIHEVLE MTIEEAREFF DAVPALARKL QTLMEVGLSY IRLGQSATTL SGGEAQRVKL
ARELSKRGTG QTLYILDEPT TGLHFADIQQ LLAVLHQLRD QGNTIVVIEH NLDVIKTADW
IVDLGPEGGS GGGEILVAGT PETVANCEAS HTARFLKPLL KKK