| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4423 |
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| Symbol | |
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| ID | 5606726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 4896787 |
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| End bp | 4897752 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640939985 |
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| Product | tRNA-dihydrouridine synthase B |
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| Protein accession | YP_001480645 |
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| Protein GI | 157372656 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000618743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATTG GACACCACCA GCTTACAAAT TGCTTGATTG CGGCCCCGAT GGCCGGCATT
ACAGATCGCC CATTTAGAGC CCTATGTCAT GCAATGGGTG CTGGGATGGC TGTATCCGAA
ATGCTCTCCT CCAATCCGGA GGTGTGGCGG ACGGATAAGT CGCGTCTGCG TATGGTCCAT
AGCGATGAAC CAGGGATCCG TTCCGTGCAG ATTGCCGGAT GCGATCCGGA TGATATGGCC
GCCGCGGCAC GTATTAACGT GGCTGGTGGC GCACAGATCA TCGACATCAA TATGGGGTGC
CCGGCCAAGA AAGTGAACCG GAAGCTTGCA GGGTCTGCAT TGCTGCAGTA CCCGGATCTG
GTTAAACAGA TCCTCCACGC GGTAGTTAAC GCTGTGGATG TGCCGGTAAC ACTTAAGATC
CGTACCGGCT GGGAACCCGA ACACCGTAAC TGTGTAGAGA TTGCCCAACT GGCCGAAGAC
TGTGGTATAC AGGCCCTGAC TATTCATGGC CGAACCCGCG CCTGCCTGTT CAACGGCAAC
GCGGAGTACG ACAGCATTCG GGCAGTTAAG CAGAGTGTTT CCATTCCGAT TATCGCGAAT
GGCGACATTA CTGACCCGCA TAAAGCCAGA GCAGTGCTCG ACTACACTGG GGCTGATGCC
CTGATGATAG GCCGCGCTGC TCAGGGGAGA CCCTGGATCT TCCGGGAAAT CCAGCATTAT
CTGGACACTG GGGAACTGCT GCCCCCTCCG CCACTTGGCG AGGTTAAGCG TTTGTTGATA
GGGCATATTC GGGAATTGCA CGGCTTTTAC GGCCAAGGCA AGGGATTCCG GATTGCTCGT
AAGCACGTAT CCTGGTATCT CCAGGAGCAC GCCCCGAATG ACCAGTTTCG GCGCACATTC
AACGCCATAG AGGATGCCAG CGAACAGCTG GAGGCGTTGG AGGCATATTT CGAAAATCTT
GCGTAA
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| Protein sequence | MRIGHHQLTN CLIAAPMAGI TDRPFRALCH AMGAGMAVSE MLSSNPEVWR TDKSRLRMVH
SDEPGIRSVQ IAGCDPDDMA AAARINVAGG AQIIDINMGC PAKKVNRKLA GSALLQYPDL
VKQILHAVVN AVDVPVTLKI RTGWEPEHRN CVEIAQLAED CGIQALTIHG RTRACLFNGN
AEYDSIRAVK QSVSIPIIAN GDITDPHKAR AVLDYTGADA LMIGRAAQGR PWIFREIQHY
LDTGELLPPP PLGEVKRLLI GHIRELHGFY GQGKGFRIAR KHVSWYLQEH APNDQFRRTF
NAIEDASEQL EALEAYFENL A
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