Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4345 |
Symbol | gltD |
ID | 5605439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 4817818 |
End bp | 4819236 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640939907 |
Product | glutamate synthase subunit beta |
Protein accession | YP_001480567 |
Protein GI | 157372578 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0056621 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00954543 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTCAGA ATGTTTATCA ATTTATCGAC CTGCAGCGCG TTGATCCGCC AAAGAAACCG CTCAAGATCC GTAAAATTGA GTTTGTAGAG ATTTACGAGC CGTTTTCGGA AAGTCAGGCG AAGGCGCAGG CGGACCGTTG TCTGTCCTGC GGTAACCCTT ATTGCGAATG GAAATGCCCG GTTCACAACT ACATCCCGAA CTGGCTGAAG CTGGCGAATG AAGGCCGCAT CATGGAGGCA GCGGATCTGG CGCACCAGAC CAACAGCCTG CCGGAAGTGT GCGGCCGCGT CTGCCCGCAG GATCGTCTGT GTGAAGGTTC CTGTACCCTG AACGACGAGT TCGGTGCGGT GACCATCGGC AACATCGAAC GCTATATCAG CGATAAAGCG ATTGAGATGG GCTGGAAACC GGACATGTCT CACGTGCTGC CTACCGGTAA ACGCGTGGCG GTGATCGGGG CCGGCCCGGC AGGCCTGGCC TGTGCCGATG TGCTGACCCG TAACGGCGTG AAAGCGGTGG TTTACGATCG TCACCCGGAG ATCGGCGGCC TGCTGACCTT CGGGATCCCG GCCTTCAAGC TGGAAAAAGA AGTGATGGTG AAGCGCCGTG GCATCTTCAG CGAAATGGGC ATTGAGTTCC AGCTCAATAC CGAAGTGGGC AAAGACATCA CCATGGAGAC GCTGCTGAGT GATTATGACG CGGTGTTCCT CGGCGTCGGT ACCTATCAGT CAATGCGCGG TGGCCTGGAG AACGAGGATG CGCCGGGGGT CTATGACGCC CTGCCGTTCC TGATCGCCAA CACCAAGCAG TTGATGGGCT ATCAGGCCGA GCAGCACGAG CCTTATGTCA GCATGGAAGG CAAACGTGTG GTGGTGCTGG GCGGTGGTGA CACCGCGATG GACTGCGTGC GTACCTCTAT TCGCCAGGGG GCAACCGACG TTATCTGCGC CTACCGCCGT GATGAAGCCA ACATGCCAGG CTCCAAACGC GAAGTGAAAA ACGCGCGTGA GGAAGGGGTT GATTTCAAAT TCAACCTGCA GCCACTGAGC ATCGAACTCA ACAGCGCCGG TCGCGTGGCC GGAGTGAAAA TGGTTCGTAC CCAGTTGGGC GCACCGGATG CCAACGGCCG CCAGATTGCT GAGCAGGTGC CAGGTTCCGA GCACATCATT GATGCCGACG CGGTGGTTAT GGCCTTTGGT TTCCGTCCGC ACCAGATGGA CTGGCTGGCC GCGCACGACG TGGAGCTCGA CAAACAGGGC CGCATTGTGG CACCGGAAAG CACCGATAAT GCCTTCCAGA CCAGCAACCC GAAAATCTTC GCCGGTGGCG ATGCGGTGCG CGGGTCGGAT CTGGTGGTAA CGGCGATTGC CGAAGGTCGT AAAGCTGCCG ATGGCATCAT GAGCTACCTG GAAGTCTAA
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Protein sequence | MSQNVYQFID LQRVDPPKKP LKIRKIEFVE IYEPFSESQA KAQADRCLSC GNPYCEWKCP VHNYIPNWLK LANEGRIMEA ADLAHQTNSL PEVCGRVCPQ DRLCEGSCTL NDEFGAVTIG NIERYISDKA IEMGWKPDMS HVLPTGKRVA VIGAGPAGLA CADVLTRNGV KAVVYDRHPE IGGLLTFGIP AFKLEKEVMV KRRGIFSEMG IEFQLNTEVG KDITMETLLS DYDAVFLGVG TYQSMRGGLE NEDAPGVYDA LPFLIANTKQ LMGYQAEQHE PYVSMEGKRV VVLGGGDTAM DCVRTSIRQG ATDVICAYRR DEANMPGSKR EVKNAREEGV DFKFNLQPLS IELNSAGRVA GVKMVRTQLG APDANGRQIA EQVPGSEHII DADAVVMAFG FRPHQMDWLA AHDVELDKQG RIVAPESTDN AFQTSNPKIF AGGDAVRGSD LVVTAIAEGR KAADGIMSYL EV
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