Gene Spro_4292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4292 
Symbol 
ID5604480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4759290 
End bp4759910 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content56% 
IMG OID640939852 
Productputative signal transduction protein 
Protein accessionYP_001480514 
Protein GI157372525 
COG category[T] Signal transduction mechanisms 
COG ID[COG3103] SH3 domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000541961 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAT TACGCCTGAT TTGCCTTGCC GTGCTGAGCT TCAGCATCAC TTGGGGCGCC 
CATGCCGAAG ATAAACGCTA TATCTCCGAT GAATTGAATA CTTACGTCCA CAGCGGCCCG
GGTAATCAGT ACCGTATTGT CGGCACCTTG AACGCCGGTG AAGAAGTGAC CCTGTTGAGC
GTAAACGACA GCACCAACTA TGGCCAGATC CGCGATGCCA AGGGCCGCAA CACCTGGATC
CCGTTGGATC AGCTTAGCCA GACCCCAAGC CTGCGCACTC AGGTGCCCGC GCTGGAGCAG
CAGGTCAAAA CCCTGACCGA TAAACTGGCC AATATCGACA ACAGCTGGAA CCAGCGTACC
GCTGAAATGC AGCAGAAAGT GGCCGGCAGC GACAGCACCA TCAGCGGCCT GCAGCAGGAA
AACCAGGATC TGAAAAACCA GCTGGTAGTG GCGCAGAAAA AGGTTAACGC GGTTAACCTG
CAGCTCGACG ACAAACAGCG CACCATTATC CTGCAGTGGT TTATGTACGG CGGTGGCGTG
GCTGGCGTAG GCCTGCTGTT GGGTCTGCTG TTACCACACC TGATCCCGCG TCGTAAAAGC
AACAACCGCT GGATGAACTG A
 
Protein sequence
MQKLRLICLA VLSFSITWGA HAEDKRYISD ELNTYVHSGP GNQYRIVGTL NAGEEVTLLS 
VNDSTNYGQI RDAKGRNTWI PLDQLSQTPS LRTQVPALEQ QVKTLTDKLA NIDNSWNQRT
AEMQQKVAGS DSTISGLQQE NQDLKNQLVV AQKKVNAVNL QLDDKQRTII LQWFMYGGGV
AGVGLLLGLL LPHLIPRRKS NNRWMN