Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4292 |
Symbol | |
ID | 5604480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 4759290 |
End bp | 4759910 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640939852 |
Product | putative signal transduction protein |
Protein accession | YP_001480514 |
Protein GI | 157372525 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3103] SH3 domain protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000541961 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAAAT TACGCCTGAT TTGCCTTGCC GTGCTGAGCT TCAGCATCAC TTGGGGCGCC CATGCCGAAG ATAAACGCTA TATCTCCGAT GAATTGAATA CTTACGTCCA CAGCGGCCCG GGTAATCAGT ACCGTATTGT CGGCACCTTG AACGCCGGTG AAGAAGTGAC CCTGTTGAGC GTAAACGACA GCACCAACTA TGGCCAGATC CGCGATGCCA AGGGCCGCAA CACCTGGATC CCGTTGGATC AGCTTAGCCA GACCCCAAGC CTGCGCACTC AGGTGCCCGC GCTGGAGCAG CAGGTCAAAA CCCTGACCGA TAAACTGGCC AATATCGACA ACAGCTGGAA CCAGCGTACC GCTGAAATGC AGCAGAAAGT GGCCGGCAGC GACAGCACCA TCAGCGGCCT GCAGCAGGAA AACCAGGATC TGAAAAACCA GCTGGTAGTG GCGCAGAAAA AGGTTAACGC GGTTAACCTG CAGCTCGACG ACAAACAGCG CACCATTATC CTGCAGTGGT TTATGTACGG CGGTGGCGTG GCTGGCGTAG GCCTGCTGTT GGGTCTGCTG TTACCACACC TGATCCCGCG TCGTAAAAGC AACAACCGCT GGATGAACTG A
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Protein sequence | MQKLRLICLA VLSFSITWGA HAEDKRYISD ELNTYVHSGP GNQYRIVGTL NAGEEVTLLS VNDSTNYGQI RDAKGRNTWI PLDQLSQTPS LRTQVPALEQ QVKTLTDKLA NIDNSWNQRT AEMQQKVAGS DSTISGLQQE NQDLKNQLVV AQKKVNAVNL QLDDKQRTII LQWFMYGGGV AGVGLLLGLL LPHLIPRRKS NNRWMN
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