Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4259 |
Symbol | |
ID | 5605829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4722183 |
End bp | 4724456 |
Gene Length | 2274 bp |
Protein Length | 757 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640939819 |
Product | DNA topoisomerase IV subunit A |
Protein accession | YP_001480481 |
Protein GI | 157372492 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000141448 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTGATC TGACTCATGA CGGTGTAGAG CGTTTACCGC TGCACACATT CACTGAAAAC GCCTATCTGA ACTATTCCAT GTACGTCATC ATGGATCGGG CGTTGCCGTA CATTGGTGAC GGTTTGAAGC CGGTACAACG CCGCATCATC TACGCCATGT CTGAGCTGGG GCTGAATAAC AGCGCCAAAT TCAAAAAATC TGCCCGTACC GTGGGTGACG TGCTGGGTAA ATATCATCCG CACGGCGACA GTGCCTGCTA TGAAGCCATG GTGTTGATGG CGCAGCCGTT CTCATATCGC TATCCGCTGG TAGACGGCCA GGGGAACTGG GGGGCGCCGG ATGACCCGAA ATCCTTCGCC GCGATGCGTT ATACCGAATC CCGCCTGTCC AAATATGCGG AAGTGTTGCT GGCCGAATTG GGCCAGGGCA CGGTTGACTG GGTGCCGAAC TTTGACGGTA CCATGCAGGA GCCGAAGATG TTGCCGGCCC GCCTGCCCAA CATCCTGCTG AACGGTACCA CCGGTATTGC CGTGGGTATG GCGACCGATA TTCCACCCCA CAACGTGCGT GAAGTGGCCG CCGCTGCGGT GGCGTTGATC GACAAGCCTG GCGCTTCGCT GGAAGAGTTA CTCGAGTTCG TACAGGGCCC GGATTACCCG ACCGAAGCCG AGATCATTAC CCCGCGTGAA GAAATCCGCA AAATTTATCA GAACGGTCGT GGCTCGGTCC GCATGCGCGC CGTCTGGAGT AAAGAAGACG GCAGCGCGGT GATCACTGCC TTGCCGCACC AGGTTTCCGG TGCCAAGGTG CTGGAGCAGA TTGCCAGCCA GATGCGTGCC AAAAAGCTGC CGATGGTCGA AGATCTGCGT GATGAATCCG ATCACGAGAA CCCAACGCGG CTGGTGATTG TGCCACGCTC GAATCGAATC GATCTCGATC AGGTGATGAA TCACCTGTTT GCCACGACCG ATCTGGAACG CAGCTACCGC ATCAACATGA ACATGATTGG TCTGGACAAC CGCCCGCAGG TGAAAGGGCT GGTGGAAATC CTCACCGAGT GGCTGGCATT CCGTCGCGAT ACGGTGCGTC GCCGCCTGAA CTACCGTCTG GAAAAAGTAC TGAAACGCCT GCACATCCTG GAAGGTTTGC TGGTGGCGTT CCTCAATATC GATGAAGTGA TCCACATCAT CCGTAGCGAG GACGAACCCA AGCCGGTGCT GATGCAGCGC TTTGGTATTT CCGATACCCA GGCCGAAGCG ATCCTCGAAC TGAAACTGCG CCATTTGGCG AAGCTGGAAG AGTTCAAGAT CCGCGGTGAG CAGGATGAGT TAGCCAAAGA GCGCGATCAA CTGCAGGCGT TGCTGGCCTC CGAGCGCAAG CTGAACACCC TGATCAAAAA AGAGATCCAG GCCGATGCGC AGGCCTATGG CGACGATCGT CGCTCGCCGA TTACCGAGCG TGCAGAAGCC AAGGCGATGA GCGAGCATGA CTTTGTGCCG TCGGAGCCGG TGACTATCGT GCTGTCTGAA ATGGGCTGGG TGCGCAGCGC CAAGGGCCAC GATATCGATC CAAGTGGCCT GAGCTACAAG GCCGGTGACA GCTTCCGCAG TGCGGCACGC GGCAAGACCA ACCAGCCGGT GGTGTTTATC GACTCCACCG GGCGCAGCTA CGCGCTGGAT CCGCTGACGC TGCCTTCGGC GCGTGGGCAG GGCGAACCGT TGACCGGCAA GCTGACGCCA CCGCCGGGCG CGACCATTGA ACAGGTGCTG ATGGCTGCGG ACGACCAGAA GTTGCTGATG GCTTCCGATG CCGGTTATGG CTTTGTCTGT ACCTTCAACG ACCTGGTGGC GCGTAACCGT GCCGGTAAGG TGATGATTAC TCTGCCGGAT AATGCCAAAG CGCTGGCGCC GATGGAAATC CACGGTGAAG ATGACATGCT GCTGTCGATC ACTGCTGCCG GGCGCATGTT GTTCTTCCCG GTTGCTGACC TGCCGCAACT GTCGAAGGGC AAGGGCAACA AGATTGTCTC CATCCCGTCG GCACAGGCCG CATCCGGTGA AGACAAGCTG GCATGGCTGT TCGTGCTGCC GCCGCAAACC TCGGTGACCC TGCACGTGGG TAAACGCAAG CTGACGCTGC GTCCGGAAGA TTTGCAGAAG TTCCGTGCGG AACGTGGCCG TAAAGGCACC TCACTGCCAC GTGGCCTGCA GCGAATCGAT CGCGTAGAGG TTGATGCCCC GGCACGTGCG CCTGGCGGTG ACAGCGAAGA ATAA
|
Protein sequence | MSDLTHDGVE RLPLHTFTEN AYLNYSMYVI MDRALPYIGD GLKPVQRRII YAMSELGLNN SAKFKKSART VGDVLGKYHP HGDSACYEAM VLMAQPFSYR YPLVDGQGNW GAPDDPKSFA AMRYTESRLS KYAEVLLAEL GQGTVDWVPN FDGTMQEPKM LPARLPNILL NGTTGIAVGM ATDIPPHNVR EVAAAAVALI DKPGASLEEL LEFVQGPDYP TEAEIITPRE EIRKIYQNGR GSVRMRAVWS KEDGSAVITA LPHQVSGAKV LEQIASQMRA KKLPMVEDLR DESDHENPTR LVIVPRSNRI DLDQVMNHLF ATTDLERSYR INMNMIGLDN RPQVKGLVEI LTEWLAFRRD TVRRRLNYRL EKVLKRLHIL EGLLVAFLNI DEVIHIIRSE DEPKPVLMQR FGISDTQAEA ILELKLRHLA KLEEFKIRGE QDELAKERDQ LQALLASERK LNTLIKKEIQ ADAQAYGDDR RSPITERAEA KAMSEHDFVP SEPVTIVLSE MGWVRSAKGH DIDPSGLSYK AGDSFRSAAR GKTNQPVVFI DSTGRSYALD PLTLPSARGQ GEPLTGKLTP PPGATIEQVL MAADDQKLLM ASDAGYGFVC TFNDLVARNR AGKVMITLPD NAKALAPMEI HGEDDMLLSI TAAGRMLFFP VADLPQLSKG KGNKIVSIPS AQAASGEDKL AWLFVLPPQT SVTLHVGKRK LTLRPEDLQK FRAERGRKGT SLPRGLQRID RVEVDAPARA PGGDSEE
|
| |