| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4118 |
|---|
| Symbol | |
|---|
| ID | 5602821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 4573178 |
|---|
| End bp | 4574887 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640939679 |
|---|
| Product | relaxase |
|---|
| Protein accession | YP_001480341 |
|---|
| Protein GI | 157372352 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGG CTATCAAAGA GCTGCTTGTC GGGACCCGGG AGATGCCGGT AAAGCCATCG
GCAATCACTT CAGGCTCACG GGGCCCTACG GGCTATTATA TACCCGCGTC AGTAGAACAG
CTCTTGAGCA CGGCGTCTCG TAAGCAGTGT TTACAGCAGT TATGGGAAAA CTGTGCACTT
CCCAAAGACC TCTATGAACA TTTCTATCTG CAGCCACTGA AGCAACTCAT CACATTGATG
CAGGAGTTGC CGGCAACTCC GCAAGGTGAG TATGCCAGGG AAGGGGGGTT GGTTGATGTC
ACCCTGCAAA CGACGACTTA TGCGGTGCGC CTGGCCAAAG GGCACATGCT GCCACCTGGG
GCCGAGCCTG AAGAACAATC GGCCCAGAAT GTACAATGGA ATGTCGTGGT GTTTTACGCT
GCGCTTTGGC ACTACCTGCC GTTGTTGAGC CAACTGCAAG GGGAGTTCCA AAGTGGCCGT
ACCTGGTTGC CCGGTCTGAC GGTGCCCAGT GAACCTTACC GCTTTCGTTT CAGTGCGATT
CAGCCAGCCC CAACATTGAC GACAAGTCAG AGTACGGTGA TTGCGGCCCG GCTGTTGCCT
GCAGAGGTAA TCGACTGGCT ATCAACACTG CCGGCGGCTA CACACTCGTT GATGACGATC
GCTTCCCGAC AGTCTGGCGC TTTACCTGTG ATAGACGAAA TCGTTCAGGA AGCGGCCAAG
CTGGCGCGCG GCGATAGCCT GTCCGTAGCA TCCTCTCCGG CATCCATCTC CGACACATTG
ACAATGGTCT TACCATCGGT GGTGCTAACT ACAGAAAAGA GCACCTCTTC AGTACCCGTG
GTTGATTTAC AAAGTGCAGT CAGCGACACC AACCTTCCGA TCGTTGAGGA ACAACTGCCG
GCGGAGATAT TAAATCAGCC CGAAGAAAAT GCAGCGTCAG CGACGGATGT ATTACTAAGC
GCGGCCTTAG ATATGCCGGT AAACGATCAA CCTTTGGTTG AGGGGGGCCT GGGGCCTGAA
ACGGTGGTCG GCATCGAGGA GGATATGCAG ACTCTGTTGT CATTGATGGC GGTTGAGGTG
TCTGCTCCGG TAATTCAGAC AGAACAGGAG TCCGGGGACG CCCCTCACCA GGATGAAGGC
CCTACACCTG CCGATAGCCC TGCGATTACT GCTGAAGTGA CTCAGGTAGT TGAGGCTGCC
GAAATAAACC GGGAGTCAGA CGCCATCGAT GATATCGCTC CCGAGGCGGA AAATTCAATA
ACCGGATTTT GTGCCCCTCA AACTACTGAC TTCGCTGCCT CGCAATCGCA AAATCTGGGC
ATTCAAGGTG ATGGGGGCAT AGCTCCCGGA GAAGTCTTTT GGCGTTGGTT AGCTGATGGA
CTCAATTCTA ATGAGATCCT CATCAACTCT GTCACCGCGC GGGTTCATCT TGTTTCTGGT
TTTGTCTTCA TCACCGTACC TGGGATTTTT TATTTGTACC TGAAACAGGC TGGCCAGGAT
GGCTCTCAAC GAGAGGGCCT TCAGGAGGAT TTTGAACGCC TGGAGAAGCA TCGTCGGGTC
AAAGGTAAAC GATTTTATTT TGCACACCTG TATGAAACAT CAGAGCGCAC AGGTGCGTTT
AAACGAACCA AAGGTTACCT CGTTAAAGCA AGTTTGCTCT ATCGGGGGAA AAACCTGCCG
GACGATAGTC CGGTTCTGGT GATCCCTTGA
|
|---|
| Protein sequence | MLKAIKELLV GTREMPVKPS AITSGSRGPT GYYIPASVEQ LLSTASRKQC LQQLWENCAL
PKDLYEHFYL QPLKQLITLM QELPATPQGE YAREGGLVDV TLQTTTYAVR LAKGHMLPPG
AEPEEQSAQN VQWNVVVFYA ALWHYLPLLS QLQGEFQSGR TWLPGLTVPS EPYRFRFSAI
QPAPTLTTSQ STVIAARLLP AEVIDWLSTL PAATHSLMTI ASRQSGALPV IDEIVQEAAK
LARGDSLSVA SSPASISDTL TMVLPSVVLT TEKSTSSVPV VDLQSAVSDT NLPIVEEQLP
AEILNQPEEN AASATDVLLS AALDMPVNDQ PLVEGGLGPE TVVGIEEDMQ TLLSLMAVEV
SAPVIQTEQE SGDAPHQDEG PTPADSPAIT AEVTQVVEAA EINRESDAID DIAPEAENSI
TGFCAPQTTD FAASQSQNLG IQGDGGIAPG EVFWRWLADG LNSNEILINS VTARVHLVSG
FVFITVPGIF YLYLKQAGQD GSQREGLQED FERLEKHRRV KGKRFYFAHL YETSERTGAF
KRTKGYLVKA SLLYRGKNLP DDSPVLVIP
|
|---|
| |