Gene Spro_3955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3955 
Symbol 
ID5603719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4382735 
End bp4383487 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content57% 
IMG OID640939515 
Productpeptidase M48 Ste24p 
Protein accessionYP_001480178 
Protein GI157372189 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC GTACCTCTTT GATTGCATTA AGCATTGCCA CTTTGGTAAG CGGCTGTCAA 
AACCTGAATA CCGATACCCT GATGCAGTCT GGCGCACAGG CGTTCCAGGC GGCGACGTTG
AGCAATAACG ACGTAAAAAC CCTGAGTGAT AAATCCTGCG CGGAGATGGA CAGCAAGGCA
CAAATCGCGC CGGCTGACAG CACCTATGCC AAGCGTCTGA ACAAAATCGC CGCGGCGCTG
GGTGATAATA TCAACGGCAC GCCGGCCAAC TACAAGGTTT ACGTCACTAA AGACGTGAAT
GCCTGGGCGA TGGCCAACGG CTGTATCCGC GTTTACAGCG GCCTGATGGA CATGATGACC
GATAATGAAG TGGAAGGCGT ACTGGGCCAT GAAATGGGCC ACGTGGCGCT GGGCCATACT
CGCAAGGCGA TGCAGGTGGC TTACGGCACC GTGGCGTTGC GTACCGCAGC GGCCTCAACC
GGCGGCATCA TCGGCTCGTT GTCACAGTCA CAACTGGCGG ACATGGGTGA AAAACTGGTG
AATGCCCAGT TCTCGCAGAA GCAGGAAAGC GAAGCGGATG ACTACTCGTT CGACCTGCTG
AAACAGCGCG GCATCGATCC GAACGGTCTG GTCACCAGCT TTGAAAAACT GGCGAAAATG
GAAGCCGGCC GTCAAAGCAG CATGTTCGAC GACCACCCGG CCTCGGAAGC GCGTGCGCAG
CACATTCGCG ACCGCATCGC GGCAGGTAAG TAA
 
Protein sequence
MKIRTSLIAL SIATLVSGCQ NLNTDTLMQS GAQAFQAATL SNNDVKTLSD KSCAEMDSKA 
QIAPADSTYA KRLNKIAAAL GDNINGTPAN YKVYVTKDVN AWAMANGCIR VYSGLMDMMT
DNEVEGVLGH EMGHVALGHT RKAMQVAYGT VALRTAAAST GGIIGSLSQS QLADMGEKLV
NAQFSQKQES EADDYSFDLL KQRGIDPNGL VTSFEKLAKM EAGRQSSMFD DHPASEARAQ
HIRDRIAAGK