| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3953 |
|---|
| Symbol | |
|---|
| ID | 5603717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4379129 |
|---|
| End bp | 4380448 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640939513 |
|---|
| Product | branched-chain amino acid transport system II carrier protein |
|---|
| Protein accession | YP_001480176 |
|---|
| Protein GI | 157372187 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1114] Branched-chain amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.726579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAC GCTTATCTCC CAAAGACATT ATCGCCCTGG GCTTTATGAC CTTCGCCCTG
TTTGTCGGCG CCGGCAATAT CATTTTCCCG CCAATGGTGG GCCTGCAGTC CGGTGAGCAT
CTGTGGCTGG CCGCCGCAGG CTTTATCGTC ACCGCCGTCG TCCTGCCGGT GATCGCGGTG
ATTGCGCTGG CGCGTGTCGG CGGCAGCATC AGCCTGTTGA CCGCACCAAT CGGCCGCAGG
GCCGGCCTGC TGCTGGCTAC CCTCTGCTAT CTGGCGCTCG GCCCGCTGTT CGCCACACCG
CGCACCGCCA ACGTTTCTTT CGCTTTGGGC ATCGCGCCTT TTACCGGCGA CGGCGCCCTG
CAGCAGTTTA TCTACAGCCT GCTGTTCTTC ACGCTGGCAA TGATTATCTC GCTGTACCCC
GGGCGGCTGC TGGATAACGT CGGCCATATT CTGGCACCGC TGAAGATCCT CGCGCTGGCC
GCACTGGGCG TCGCCGCGTT GATTTGGCCC GCCGGCGCGC CCATCCTCGC CAGCGGCAGC
TATCAGGACG CGGCGTTCTC CACCGGTTTT GTGCAGGGAT ATCTGACGAT GGACACGCTG
TCGGCGCTGA TGTTCGGCTC GATTATCGTT ACCGCCGCAC GGTCGCGCGG CGTCAACGAT
CGGGGTTTGT TGATGCGCTA CACTCTGTGG GCCAGCCTGA TTGCCGGCAT CGGCCTGACA
CTGGTTTATA TCTGCATGTT CAAGCTGGGC GCCGGCAGCG GCGGCCTGGT TGCCGACGGG
CAAGACGGCG CGGCAATCCT GCATGCCTAT GTACAGCACA CCTTCGGCGA TTTGGGCAGC
GTCTTTATGG CCATCCTGAT GTTCATCGCC TGTCTGGTGA CTGCGGTGGG CATGACCTGC
GCCTGCGCCG ATTTCTTCTC CCGCTATCTG CCGCTGTCTT ACCGTTCACT GGTGGTCCTC
CTCGCTGCGT TCGCCATGCT GGTGTCCAAT CTCGGGCTGG CCAATCTGAT CCGCGTATCG
ATTCCGGTGC TGACGGCCAT CTATCCTCCG TGCATCGCCC TGGTATTGCT CAGCTTTAGC
CAGAGCCGTT GGCGCAGCGC CAACCGCGTG TTCACACCGG TGATCGCCAC CAGTCTGCTG
CTTGGCCTCG CCGACGGAAT AAAGGCCTCC AGCTTCAGCG GCCTGCTGCC GGCCTGGTTC
GATCAACTGC CGTTGGCGGA TCAGGGATTG GTTTGGTTGC AGCCGACGCT GTTAGTGCTG
TTGCTGGCGG CGGTTTACGA TCGGTTGCGC GCACCGCGCC GCGCCGGGAC GATGGCCTAA
|
|---|
| Protein sequence | MTTRLSPKDI IALGFMTFAL FVGAGNIIFP PMVGLQSGEH LWLAAAGFIV TAVVLPVIAV
IALARVGGSI SLLTAPIGRR AGLLLATLCY LALGPLFATP RTANVSFALG IAPFTGDGAL
QQFIYSLLFF TLAMIISLYP GRLLDNVGHI LAPLKILALA ALGVAALIWP AGAPILASGS
YQDAAFSTGF VQGYLTMDTL SALMFGSIIV TAARSRGVND RGLLMRYTLW ASLIAGIGLT
LVYICMFKLG AGSGGLVADG QDGAAILHAY VQHTFGDLGS VFMAILMFIA CLVTAVGMTC
ACADFFSRYL PLSYRSLVVL LAAFAMLVSN LGLANLIRVS IPVLTAIYPP CIALVLLSFS
QSRWRSANRV FTPVIATSLL LGLADGIKAS SFSGLLPAWF DQLPLADQGL VWLQPTLLVL
LLAAVYDRLR APRRAGTMA
|
|---|
| |