| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3949 |
|---|
| Symbol | |
|---|
| ID | 5603760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 4375175 |
|---|
| End bp | 4376263 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640939509 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001480172 |
|---|
| Protein GI | 157372183 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.43441 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACAA GAATCGGCGC GTCGGTAGTG GCGATGGCTG TACTGGGCGC GGTGCCTGCT
TACGCTGAAT TCCCGGCAGG CTATCCAGCC GACTATCAAA AAATTGTGGA TGGCGCGAAG
AAAGAGGGCA AGGTGGTGGT GTACTCCACC ACGGATACCA AGGCCGCCGG GCCACTGATT
CAGGGGTTCG AAGCGTTGTA TCCTGGCGTT AAGGTCGAAT ACAACGACAT GAACAGCACC
GAACTGTACA ACCGCTATAT CAGCGAACAG GCGGCGGGAG GCACCAGCGG TGACGTGGTG
TGGAGCTCGT CGATGGATAC CGCGCTGAAA CTGGCGACCG ATTATGCACA GGAATACGCT
TCGCCGGAAC AGGGCCAACT GCCCAAGTGG GCGGTCTGGA AAGACAAAGC CTACGGTACC
ACCTACGAAC CGGTGGTCTT CATCTATAAC AAACGGTTGA TCCCGCAGGG TGATGTACCG
GATTCTCACG CCGCGCTGGC CAAGTTGATC GCCAGCCAGA CCGACAAGTT CAAAAAGAAA
GTCACCACCT ATGACATTGA AAAGTCAGGG TTGGGCTTCA TGCTGTCGGT GCAGGACTTC
AAGGCCGACC CGAACTATTT CGCCACCCTG GCTGACGTCG CCAAAGGGGG GCTGGCGGTG
CAATCTTCTA CCGGCACCAT GATGGAAAGG GTGTCATCCG GTGAAAACCT GATTGGTTTC
AACATCCTGG GTTCCTACGC CGAAGCACGA GCCAAAACCG ACCCTTCGCT GGGCATCTCT
TATCCGAAGG ATTACACCCT GGTGCTGTCG CGCGTGTCCT TTATCAGCAA AGAGGCTGCC
AACGGCAATG CGGCAAAACT GTGGCTTAAC TACGTGCTGT CGGAAAAGGG CCAGAGCATT
CTCGCCAACC AGGCCGATAT TCCGTCTATT CGTAACGATA TTGAAGGCAA AAACGACATC
GACGGCATGA CCAAAATGCT CGGCAAAGCG CTCAAACCGA TCCCGGTGGA TGAAAGCCTG
CTGGAGTACC TGCAGCCGGC CAAACGCCTG GATTACATCA AGCAATGGCG TACCGCCGCC
GCGAAATAA
|
|---|
| Protein sequence | MLTRIGASVV AMAVLGAVPA YAEFPAGYPA DYQKIVDGAK KEGKVVVYST TDTKAAGPLI
QGFEALYPGV KVEYNDMNST ELYNRYISEQ AAGGTSGDVV WSSSMDTALK LATDYAQEYA
SPEQGQLPKW AVWKDKAYGT TYEPVVFIYN KRLIPQGDVP DSHAALAKLI ASQTDKFKKK
VTTYDIEKSG LGFMLSVQDF KADPNYFATL ADVAKGGLAV QSSTGTMMER VSSGENLIGF
NILGSYAEAR AKTDPSLGIS YPKDYTLVLS RVSFISKEAA NGNAAKLWLN YVLSEKGQSI
LANQADIPSI RNDIEGKNDI DGMTKMLGKA LKPIPVDESL LEYLQPAKRL DYIKQWRTAA
AK
|
|---|
| |