Gene Spro_3909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3909 
Symbol 
ID5604560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4327254 
End bp4328000 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content60% 
IMG OID640939469 
Producthypothetical protein 
Protein accessionYP_001480132 
Protein GI157372143 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAG TTGCATTGGT CACCGGTGCC AGTCGGGGTA TTGGCCGCGC TACGGCGCTA 
CTGCTGGCAC GTCAGGGTTA CGCGGTAGGC GTTAACTATC TGCAAAATGA AGCTGCGGCG
CAACAGGTGG TCGCGGAGAT AGAATCACTG GGCGGCCGGG CGCTGGCGCT GCGTGCCGAT
ATTGGCGATG AAAGCCAGGT ACAGGCGATG TTTAGCCAAC TGGATGCCAC CCTCGGGCCC
ATTGATGCTC TGGTCAACAA TGCCGGTATT CTGTTTCAGC AGTCGAGCAT TGAACAACTG
ACCGCCGAGC GTATTAACAA GGTATTGACT ACCAACGTTA CCGGTTATTT TCTCTGTTGC
CGCGAGACGG TGAAGCGCAT GGCGCATCGT CATGGCGGGC AGGGCGGGGC GATCGTCAAT
GTCTCTTCCG CTGCAGCACG CTTAGGCGCA CCGGGCGAAT ACATCGACTA TGCCGCCTCT
AAAGGGGCGG TGGACACGCT AACTACCGGA CTGGCGTTGG AGGTGGCGGC GCAGGGCATT
CGCGTCAACG CGGTGCGGCC GGGGCTTATT TATACCGAAA TGCATGCCAG CGGCGGCGAG
CCTGGGCGCG TTGATCGGGT AAAAAGCAGC CTGCCGATGC AACGCGGCGG TACCCCGGAA
GAGGTGGCAG AAATCATCGC CTGGCTGCTG TCCGATGCCG CTTCTTACGT CACCGGCAGC
TTTATCGAGG CTGCCGGCGG TCGTTGA
 
Protein sequence
MTKVALVTGA SRGIGRATAL LLARQGYAVG VNYLQNEAAA QQVVAEIESL GGRALALRAD 
IGDESQVQAM FSQLDATLGP IDALVNNAGI LFQQSSIEQL TAERINKVLT TNVTGYFLCC
RETVKRMAHR HGGQGGAIVN VSSAAARLGA PGEYIDYAAS KGAVDTLTTG LALEVAAQGI
RVNAVRPGLI YTEMHASGGE PGRVDRVKSS LPMQRGGTPE EVAEIIAWLL SDAASYVTGS
FIEAAGGR