Gene Spro_3887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3887 
Symbol 
ID5605325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4305958 
End bp4307172 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content52% 
IMG OID640939447 
Productintegrase family protein 
Protein accessionYP_001480111 
Protein GI157372122 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTCA CAGACCTTGA GCTACGGCGC TCTAAACCGC AAGACAAGCC CTATACACTC 
AGTGATGGCG GTGGGCTTTC TATACTCATT GAGCCGAACG GTTCCAAAGG CTGGCGCTTT
CGCTACCGCT TCGACGGTAA ACCAAAAATG CTTTCCCTCG GCACATACCC CACAGTTTCA
CTAACCGACG CAAGGCAAAA GCGCGATGAG GCTAAAAAGC TGGTGGTGTC AGGTATCAAT
CCCAGCGAAG CCAGGAAGCA GCAGAAACGA GATCGGCAAG ATGTTACTGG CAATACCTTT
GAGGGGATAG CGCGGGAATG GTACGAAAAG CGGCGCGATC GCTGGTCAGA GTCATACGCA
GAAGAGATGA TGAAAACGTT TGAGAGCGAT GTTTTCCCAT ACATCGGCAA TCGGCCAATT
GCCGAGATAA AGCCAATGGA GCTTATGGGG ACGCTTTCTA AACTGGATGA ACGCGGCGCA
ACAGAGAAAT TGCGCAAGGT GCGCCAGCGA TGCGGGGAGG TATGGAAATA CGCCATCGTT
ACTGGCCGGG CTGAATATAA CCCAGCCCCG GATCTCGCCA GTGCGTTCTC ACCGCATAAA
AAAGAGCACT ATGCGTTCTT GTCAGTTGCC GAGCTGCCCG AGTTTTTCCG CATCTTTAAC
ACATATACCG GCAGCCTGAT CGTTAAGCTG GCTATGCGCT TGCTTATTAT CACAGGGACA
AGGCCGGGAG AGCTGCGCAA GGCTGAATGG TCGGAGTTTG ATTTTGATAA CCGGCTTTGG
GAAGTACCGC CTGAACGCAT GAAGAAACGT CGCCCTCATT GCGTGCCACT ATCTGATCAG
GCTATCAGCA TTCTGGAACA GCTAAAACCG CTGACCGGTC ATTACAGCTT TGTGTTTCCG
GGCAGGATCC ACCACAGCAA GCCAATAAGC GAAATGGCTA TGAATGTGCT GGTTCGCCGT
ATTGGTTATG CCGGGCGTGT AACGGGGCAC GGATTCCGGC ATACCATGAG TACCATCCTG
CATGAACAAG GCTATAACAC TGCGTGGATT GAAACCCAGT TGGCCCACGT TGATAAGAAT
AGTATTCGTG GAACCTATAA CCATGCCCAA TACCTTGATG GACGCCGGGA GATGCTTCAG
TGGTATGCCG ACTATATGGA CAGCCTGGAG CTGGGAGGCA ATGTGGTTCA CGGCTCGTTC
GGAAAGCAGG CATAA
 
Protein sequence
MPLTDLELRR SKPQDKPYTL SDGGGLSILI EPNGSKGWRF RYRFDGKPKM LSLGTYPTVS 
LTDARQKRDE AKKLVVSGIN PSEARKQQKR DRQDVTGNTF EGIAREWYEK RRDRWSESYA
EEMMKTFESD VFPYIGNRPI AEIKPMELMG TLSKLDERGA TEKLRKVRQR CGEVWKYAIV
TGRAEYNPAP DLASAFSPHK KEHYAFLSVA ELPEFFRIFN TYTGSLIVKL AMRLLIITGT
RPGELRKAEW SEFDFDNRLW EVPPERMKKR RPHCVPLSDQ AISILEQLKP LTGHYSFVFP
GRIHHSKPIS EMAMNVLVRR IGYAGRVTGH GFRHTMSTIL HEQGYNTAWI ETQLAHVDKN
SIRGTYNHAQ YLDGRREMLQ WYADYMDSLE LGGNVVHGSF GKQA