| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3847 |
|---|
| Symbol | |
|---|
| ID | 5606252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 4257414 |
|---|
| End bp | 4257890 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640939407 |
|---|
| Product | PTS system mannose/fructose/sorbose family IIB subunit |
|---|
| Protein accession | YP_001480071 |
|---|
| Protein GI | 157372082 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB |
|---|
| TIGRFAM ID | [TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.9499 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAATA TCCTGATGAC CCGCATTGAT AACCGACTGG TACATGGCCA GGTCGGTGTT
ACCTGGACCA ACACCCTGGG GGCCAATCTG GTGGTGGTGG CCAACGATGA AGCGGCAGCC
GATCCGGTGC AGCAGAACCT GATGGATATG GTGGTGGCGG AGGGGGTGCA GACGCGCTAC
TTCACGCTGC AGAAAACCAT CGACGTGATC CACAAGGCGG CGGATCGCCA GAAGATCTTT
TTAGTGTGCA AAACGCCGCA GGATGTTTTG CGGCTGGTAC AGGGCGGAGT ACCGATCCGT
TTCGTCAACG TCGGCAATAT GCATTTCGCC GAGGGCAAGC GGCAGGTGCA TAAAACGGTC
TCGCTGGATG AGGGTGACGT GGCCGCCTTT CGCGAACTGG CGGCGCTGGG CGTCGAGTGT
GAGGTGCGTC GGGTGCCGGA TGAAGCGGGT GAGCCTGTCG GCAAACTGCT GTTTTGA
|
|---|
| Protein sequence | MPNILMTRID NRLVHGQVGV TWTNTLGANL VVVANDEAAA DPVQQNLMDM VVAEGVQTRY
FTLQKTIDVI HKAADRQKIF LVCKTPQDVL RLVQGGVPIR FVNVGNMHFA EGKRQVHKTV
SLDEGDVAAF RELAALGVEC EVRRVPDEAG EPVGKLLF
|
|---|
| |