| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3768 |
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| Symbol | cadB |
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| ID | 5603153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 4163917 |
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| End bp | 4165266 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640939325 |
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| Product | lysine/cadaverine antiporter |
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| Protein accession | YP_001479992 |
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| Protein GI | 157372003 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000519797 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.028767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTCAT CCAAGAAAAT AGGGCTTATT GCCTGCACCG GTGTGGTTGC CGGTAATATG
ATGGGGAGCG GTATTGCCTT ATTACCCGCG AACCTGGCAA GCCTCGGTTC TATCGCCATC
TGGGGATGGG TAATCTCTAT TATTGGCGCG ATGTCACTGG CTTATGTCTA TGCGCGTCTG
GCCACCAAAA ACCCTCAGCA GGGTGGCCCT ATTGCTTACG CGGGTGAAAT TTCCCCGGCG
TTTGGTTTCC AGACCGGTGT GCTTTATTAC CATGCGAACT GGATCGGTAA TTTGGCCATC
GGCATTACCG CAGTTTCTTA TCTCTCTACC TTCTTCCCTG CATTGAATAA TCCGGTACCG
GCAGGTATTG CCTGTATCGC CATCGTCTGG ATATTCACCT TTGTTAACCT GCTTGGCGGG
ACCTGGGTCA GCCGCTTGAC CACCCTCGGC CTGGTGCTGG TGCTGATCCC GGTGATTGTC
ACCGCGACTG CGGGCTGGCA TTGGTTCGAC GCTGCAACCT ACCACGCTAA CTGGAACACT
TCCGGTACCA CCGACAGCCA TGCGGTAATC AAAAGTATTC TGCTGTGCCT GTGGGCGTTC
ATCGGCGTAG AGTCTGCCGC CGTGAGCACC GGCATGGTGA AAAACCCGAA ACGCACCGTA
CCGCTGGCAA CCATGCTGGG TACCGCGCTG GCCGGGATTA TCTACATTGC GGCCACTCAG
GTGATGAGCG GTATGTTCCC GGCTAGCCAA ATGGCTGCCA GCGGTGCACC GTTCGCCGTC
AGCGCCTCCG CCATTATGGG TAACTGGGCT GCACCACTGG TCTCTGCCTT CACCGCCTTT
GCCTGCCTGA CTTCACTGGG TTCGTGGATG ATGCTGGTTG GCCAGGCCGG GGTTCGTGCC
GCCAACGACG GTAACTTCCC GAAAGTTTAT GGTGAAGTCG ATAAAAACGG CGTGCCGAAA
AAAGGCCTGC TGCTGGCAAG CTGCAAAATG ACCGCGCTGA TGGTGCTGAT TACCGCCATG
AGCTCCGGCG GCGGTAAAGC TTCCGACCTG TTCGGCATGC TGACCGGTAT TGCGGTGCTG
CTGACCATGT TGCCTTACTT CTACTCTTGC GTAGACCTGA TCCGCTTCGA AGGCGTCAAT
ATCCGTAACC TGTTGAGCCT GATTGCCTCG GTTCTGGGTT GTGGCTTCTG CTTCATCGCA
CTGATGGGGG CCGAATCGTT CGAACTGGCC GGTACCTTCA TCATCAGCCT GATCATCCTG
ATGTTCTACG CCCGCAAAAT GAATACCCGT CAGACAGCGA AAGCCAATGC TGTAGCCATC
GACGACAGCT CGACGGCCAA AGCGCACTAA
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| Protein sequence | MGSSKKIGLI ACTGVVAGNM MGSGIALLPA NLASLGSIAI WGWVISIIGA MSLAYVYARL
ATKNPQQGGP IAYAGEISPA FGFQTGVLYY HANWIGNLAI GITAVSYLST FFPALNNPVP
AGIACIAIVW IFTFVNLLGG TWVSRLTTLG LVLVLIPVIV TATAGWHWFD AATYHANWNT
SGTTDSHAVI KSILLCLWAF IGVESAAVST GMVKNPKRTV PLATMLGTAL AGIIYIAATQ
VMSGMFPASQ MAASGAPFAV SASAIMGNWA APLVSAFTAF ACLTSLGSWM MLVGQAGVRA
ANDGNFPKVY GEVDKNGVPK KGLLLASCKM TALMVLITAM SSGGGKASDL FGMLTGIAVL
LTMLPYFYSC VDLIRFEGVN IRNLLSLIAS VLGCGFCFIA LMGAESFELA GTFIISLIIL
MFYARKMNTR QTAKANAVAI DDSSTAKAH
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