Gene Spro_3724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3724 
SymbolnrdF 
ID5607389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4113010 
End bp4113981 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content57% 
IMG OID640939276 
Productribonucleotide-diphosphate reductase subunit beta 
Protein accessionYP_001479948 
Protein GI157371959 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0208] Ribonucleotide reductase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCA TTAAACCGGC GCAACTGGTG CGCGCAGTCA ACTGGAACAT CATCGAAGAC 
GACAAGGATC TGGAGGTGTG GAACCGTCTG ACCTCCAACT TCTGGCTGCC GGAGAAGGTG
CCGCTGTCGA ACGATATTCC CTCGTGGGCC ACGCTGACAC CGAAGGAACA GCAACTGACC
ATCCGGGTTT TCACCGGCCT GACGCTGCTC GATACCATTC AAAATACCGT CGGGGCACCC
GCGCTGATCG CCGATGCCAT TACGCCGCAC GAGGAGGCGG TGTACTCCAA TATCAGCTTT
ATGGAGGCGG TACACGCCCG CTCCTACAGC TCGATTTTCT CCACGCTGTG CCAAACGCCG
GACGTCGACG ACGCCTACCG CTGGAGCGAG GAAAACCGTG CGCTGCAGAA AAAGGCCAGC
ATCATTTTGG CCCACTACCG CAGTGACGAT CCGCTGATGA AGAAGGTCGC CAGCGTGTTC
CTTGAGTCGT TCCTGTTCTA TTCGGGCTTT TACCTGCCGA TGTACTGGTC GAGCCGCGCC
AAACTGACCA ACACCGCCGA CCTGATCCGG CTGATCATCC GCGACGAGGC GGTACACGGC
TATTACATTG GCTATAAATT CCAGAAAGGG TTGGAGAAGG TCGATGCCGC CCGCCGGCAA
CAGGTGAAAA ACTTCGCCTT CGATCTGCTG CAGGATCTGT ATGACAACGA GGTGCGGTAC
ACCGAAGAGC TGTACGACGG GGTGGGTTGG ACCGAGGACG TGAAAACCTT CCTGCATTAT
AACGCCAACA AGGCGCTGAT GAATCTGGGG TACGAAGCGC TGTTCCCACC GTCGATGGCG
GAGGTCAATC CGGCGATTCT GTCGGCGCTG TCGCCGAACG CCGATGAGAA CCACGACTTC
TTCTCCGGCT CCGGCTCGTC ATACGTGATT GGCAAAGCGG TCAATACCGA GGATGACGAC
TGGGATTTTT GA
 
Protein sequence
MNSIKPAQLV RAVNWNIIED DKDLEVWNRL TSNFWLPEKV PLSNDIPSWA TLTPKEQQLT 
IRVFTGLTLL DTIQNTVGAP ALIADAITPH EEAVYSNISF MEAVHARSYS SIFSTLCQTP
DVDDAYRWSE ENRALQKKAS IILAHYRSDD PLMKKVASVF LESFLFYSGF YLPMYWSSRA
KLTNTADLIR LIIRDEAVHG YYIGYKFQKG LEKVDAARRQ QVKNFAFDLL QDLYDNEVRY
TEELYDGVGW TEDVKTFLHY NANKALMNLG YEALFPPSMA EVNPAILSAL SPNADENHDF
FSGSGSSYVI GKAVNTEDDD WDF