| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3700 |
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| Symbol | |
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| ID | 5607026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 4090728 |
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| End bp | 4093829 |
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| Gene Length | 3102 bp |
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| Protein Length | 1033 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640939252 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001479924 |
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| Protein GI | 157371935 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAATT TCTTTATCAA CCGCCCGATA TTTGCCTGGG TCATCGCCAT CATCGTCATG
ATGGCCGGTG CCCTGTCCAT CATGAAGCTG CCGATCGCGC AGTATCCGAC CATCGCGCCG
CCGGCGGTCA GTATCAGCGC CACCTATCCG GGGGCCGACG CCAAGACGGT GCAGGATACG
GTCACCCAGG TGATTGAGCA GAATATGAAT GGCCTGGACG GCCTGATGTA CATGTCGTCC
AACAGTGACG CCGCCGGTAA CGCCACGGTC ACCCTGACCT TTGCCACCGG CACCGATCCG
GACATTGCTC AGGTTCAGGT GCAAAACAAG CTGCAACTGG CGATGCCGCT GCTGCCGCAG
ACCGTGCAGG ATCAGGGGAT TAACGTGCAG AAGGCCTCCA GCAGTTTCCT GATGGTGGCC
GCCTTCACTT CCGACAGCAG TGCCATGACG CAGGCCGATC TGGCGGACTA TGCGGTCGCC
AATATCAAAG ACCCGATCAG CCGTACCAGC GGCGTCGGTC AGGTACAGTT ATTCGGCGCG
CAATACGCTA TGCGCATCTG GCTGGATCCC AACAAGCTGG ATAATTACCA ACTGACCAGC
GAAGACGTGG TGCGAGCCAT CAAGGCGCAG AACAACCAGA TTGCCGGTGG CCAGCTCGGC
GCCCTGCCGG CGGTACCGGG GCAGCAGCTC AACGCATCGA TCATTGCCCA AACCCGCCTC
AGTTCGCCGC AGCAGTTCGG CAATATCCTG CTGCGCGTCA ATCAGGATGG TTCTCAGGTG
CATCTGCGTG ACGTTGCGCG CATTGCGCTG GGCAGCGAAA ACTACACCAC CAGCGCCGAA
TACAACGGCA AACCGGCCGC CGGGCTGGGG GTTAAATTAG CCACCGGCGC CAACGCACTG
GATACCGCCA ACGCGGTGAA GGCTGAAATT GGTCGTCTGG AACCTTATTT CCCGGCCGGG
ATGCACGTGG TATATCCGTA TGACACCACG CCGTTCGTTA AAATCTCGAT CGGTGAAGTG
GTGAAAACGC TGATCGAAGC CATCATCCTG GTGTTCCTGG TGATGTATCT GTTCCTGCAA
AATCTCCGTG CCACGCTGAT CCCGACCATT GCGGTGCCGG TGGTGTTGCT GGGGACCTTT
GCCATTCTGG CGGCCTTTGG CTTCTCGATA AACACCCTGA CGATGTTCGG CATGGTGCTG
GCGATAGGCC TGTTGGTGGA TGATGCCATC GTGGTGGTCG AGAACGTCGA ACGGGTCATG
ACGGAGGAAG GGTTACCGCC CAAAGAGGCC ACACGCAAAT CGATGGCGCA GATCCAGGGC
GCACTAGTGG GCATCGCCAT GGTGCTGTCG GCGGTATTTA TTCCCATGGC GTTCTTCGGT
GGCTCAACCG GCGCCATCTA TCGCCAGTTT TCAGTCACCA TCGTTTCCGC CATGGTGCTG
TCGGTACTGG TGGCGATGAT CCTGACTCCG GCACTGTGCG TCACGCTGTT GAAACCCGGC
GTGCATGCGC CCAAAACCGG CTTCTTCGCC TGGTTTAACC GCCTGTTCGA ACGCAGCACC
CAACATTATC AGGGCAGCAT CGGCAATATC CTCAACCATA CCGGTCGTAT GCTGCTGATC
TACCTGCTGA TTGTGATTGG TATGGCGCTG CTGTTCATCC GCTTGCCCAC CGCCTTCCTG
CCCGACGAGG ATCAGGGAGT ATTCATGAAC ATGATCCAAC TGCCGGCCGG CGCCACCCAG
CAACGCACCG AGGCCGTATT GGGCCAGGTA ACCCACTACT ACCTGAACAA GGAGAAGGCT
AACGTCAATT CGGTCTTCAC CGTTGCCGGG TTCGGCTTTA ACGGCAACGG CCAGAATAAC
GGGTTGGCGT TTGTCAGCCT GAAGGACTGG AGCCAACGTC CGGGGGAGAA AAACAAGGTT
GAGGCGATCA TCAAGCGCGC CAATATGGCC TTTGCCCACA CGATCAAACA AGGCATCGCC
TTTGCCTTTA ACCTGCCGGC GATTACCGAT CTCGGCACCG CTACCGGCTT TGACTTCGAG
CTGATCGACA ACGGCGGCCT CGGCCATGCC GCGTTAACCA AGGCACGTAA CCAATTGCTG
TTTATGGCCG CCAAATACCC TAACGTGGCA ACCAAAATTC GTCCGAATGG CCTGGAGGAC
ACGCCGCAGT TCAAGGTCGA TGTCGATCAG GCCAAGGCCG AGGCGCTGGG GGTTTCGGTT
GACGACATCA ACCAGACGCT GTCCACCGCC TGGGGCGGCA CCTACGTTAA TGACTTTATC
GATCGCGGTC GGGTGAAAAA GGTCTATGTG CAGGCCGATG CGCCGTACCG CATGCTGCCG
GACGATCTCA ACCAGTGGTA CGTGAAGGGT AACCGCGGCC AGATGGTACC GTTTTCCGCC
TTTGCCAGCG CGCACTGGGA ATACGGCTCA CCACGCCTGG AGCGTTACAA CGGTCTGCCT
TCGATGGAAA TTCTGGGTGA ACCGGCCCCG GGGCGCAGTT CAGGCCAGGC GATGATGCTG
ATGGAAAAAC TGGCGGCCAA ACTGCCGAAG GGCATCGGCT ATGACTGGAC CGGCATGTCT
TATCAGGAAC GGCTTTCCGG CAACCAGGCT CCCGCGCTGT ACGCCATCTC GCTGGTGGTG
GTGTTCCTGT GCCTGGCGGC GCTGTATGAG AGCTGGTCCA TCCCGTTTGC CGTAATGCTG
GTGGTGCCGC TCGGCGTGGT CGGTGCGCTG CTGGGGGCCA CCTTACGCGG CCTCAATAAC
GACGTTTACT TCCAGGTCGG CCTGCTGACC ACCATTGGCC TGTCAGCCAA AAACGCCATT
CTTATCGTCG AATTCGCCAA GGATCTGATG GAGAAAGAGG GCAAACCGCT GATTGCCGCC
ACCCTTGAAG CCACCCGCAT GCGCCTGCGT CCGATTCTGA TGACCTCGCT GGCCTTTATC
CTTGGCGTGC TGCCGCTGGT TCTCAGCAGC GGCGCCGGTT CCGGCGCGCA GAACGCAGTC
GGCACCGGCG TCATGTTCGG CATGATCAGC GCCACCCTGC TGGCGATATT CCTGGTCCCG
GTATTCTTCG TTGTCGTCCA ACGTCGCTTC GGCCGTAAAT AA
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| Protein sequence | MSNFFINRPI FAWVIAIIVM MAGALSIMKL PIAQYPTIAP PAVSISATYP GADAKTVQDT
VTQVIEQNMN GLDGLMYMSS NSDAAGNATV TLTFATGTDP DIAQVQVQNK LQLAMPLLPQ
TVQDQGINVQ KASSSFLMVA AFTSDSSAMT QADLADYAVA NIKDPISRTS GVGQVQLFGA
QYAMRIWLDP NKLDNYQLTS EDVVRAIKAQ NNQIAGGQLG ALPAVPGQQL NASIIAQTRL
SSPQQFGNIL LRVNQDGSQV HLRDVARIAL GSENYTTSAE YNGKPAAGLG VKLATGANAL
DTANAVKAEI GRLEPYFPAG MHVVYPYDTT PFVKISIGEV VKTLIEAIIL VFLVMYLFLQ
NLRATLIPTI AVPVVLLGTF AILAAFGFSI NTLTMFGMVL AIGLLVDDAI VVVENVERVM
TEEGLPPKEA TRKSMAQIQG ALVGIAMVLS AVFIPMAFFG GSTGAIYRQF SVTIVSAMVL
SVLVAMILTP ALCVTLLKPG VHAPKTGFFA WFNRLFERST QHYQGSIGNI LNHTGRMLLI
YLLIVIGMAL LFIRLPTAFL PDEDQGVFMN MIQLPAGATQ QRTEAVLGQV THYYLNKEKA
NVNSVFTVAG FGFNGNGQNN GLAFVSLKDW SQRPGEKNKV EAIIKRANMA FAHTIKQGIA
FAFNLPAITD LGTATGFDFE LIDNGGLGHA ALTKARNQLL FMAAKYPNVA TKIRPNGLED
TPQFKVDVDQ AKAEALGVSV DDINQTLSTA WGGTYVNDFI DRGRVKKVYV QADAPYRMLP
DDLNQWYVKG NRGQMVPFSA FASAHWEYGS PRLERYNGLP SMEILGEPAP GRSSGQAMML
MEKLAAKLPK GIGYDWTGMS YQERLSGNQA PALYAISLVV VFLCLAALYE SWSIPFAVML
VVPLGVVGAL LGATLRGLNN DVYFQVGLLT TIGLSAKNAI LIVEFAKDLM EKEGKPLIAA
TLEATRMRLR PILMTSLAFI LGVLPLVLSS GAGSGAQNAV GTGVMFGMIS ATLLAIFLVP
VFFVVVQRRF GRK
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